Dutch name: Laboratorium voor Bioinformatica en Ecosysteembiology
Parent institute: KU Leuven; Rega-instituut; Department of Microbiology and Immunology (KULeuven), more
Address:
Herestraat 49
box 1028
B-3000 Leuven
Belgium
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Type: Scientific
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1 Director: Head of the department 2 Marine scientist: Works in this research group and acts as (co-)author in at least one marine publication in the last 5 years. 3 Specialized personnel: Provides administrative or technical support to marine scientific research.
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| Abstract: |
The Raes lab combines large-scale, next-generation sequencing with novel computational approaches to investigate the functioning and variability of microbial communities. In addition, the lab focuses on the development of computational methods for the analysis of (next-generation) sequence data and the investigation of community properties from metagenomics, metatranscriptomics and meta-metabolomics data, which are applied in a wide range of environments (ocean, soil, etc.).
The marine research of the lab focuses on comparative metagenomics and metatranscriptomics of ocean plankton communities, from viruses to fish larvae. This research is also part of the Bioinformatics and (Eco-)systems Biology lab of VIB. |
| Publications (2) |
Top | Persons |
( 2 peer reviewed ) split up filter
 Carradec, Q.; Pelletier, E.; Da Silva, C.; Alberti, A.; Seeleuthner, Y.; Blanc-Mathieu, R.; Lima-Mendez, G.; Rocha, F.; Tirichine, L.; Labadie, K.; Kirilovsky, A.; Bertrand, A.; Engelen, S.; Madoui, M.-A.; Méheust, R.; Poulain, J.; Romac, S.; Richter, D.J.; Yoshikawa, G.; Dimier, C.; Kandels-Lewis, S.; Picheral, M.; Searson, S.; Tara Oceans Coordinators; Jaillon, O.; Aury, J.-M.; Karsenti, E.; Sullivan, M.B.; Sunagawa, S.; Bork, P.; Not, F.; Hingamp, P.; Raes, J.; Guidi, L.; Ogata, H.; de Vargas, C.; Iudicone, D.; Bowler, C.; Wincker, P. (2018). A global ocean atlas of eukaryotic genes. Nature Comm. 9(1): 13 pp. https://dx.doi.org/10.1038/s41467-017-02342-1, more- Guidi, L.; Chaffron, S.; Bittner, L.; Eveillard, D.; Larhlimi, A.; Roux, S.; Darzi, Y.; Audic, S.; Berline, L.; Brum, J.R.; Coelho, L.P.; Ignacio-Espinoza, J.C.; Malviya, S.; Sunagawa, S.; Dimier, C.; Kandels-Lewis, S.; Picheral, M.; Poulain, J.; Searson, S.; Tara Oceans Consortium Coordinators; Stemmann, L.; Not, F.; Hingamp, P.; Speich, S.; Follows, M.; Karp-Boss, L.; Boss, E.S.; Ogata, H.; Pesant, S.; Weissenbach, J.; Wincker, P.; Acinas, S.G.; Bork, P.; de Vargas, C.; Iudicone, D.; Sullivan, M.B.; Raes, J.; Karsenti, E.; Bowler, C.; Gorsky, G. (2016). Plankton networks driving carbon export in the oligotrophic ocean. Nature (Lond.) 532(7600): 465-470. https://hdl.handle.net/10.1038/nature16942, more
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