| | Expertise |
Thesaurus term: Marine ecology
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| Projects (8) |
Top | Publications | Projects | Datasets |
- From sky to seafloor observation: Achieving eXcellence in Oceanic surveiLlance and cOnservation Through deep Learning
, more
- Genetic Tools for Ecosystem Health Assessment in the North Sea Region, more
- Genomic Observatories under European Projects EMO BON and ARMS-MBON, more
- Imaging data and services for aquatic science, more
- Integration of biodiversity monitoring data into the Digital Twin Ocean, more
- MARine COastal BiOdiversity Long-term Observations, more
- Operational sensing life technologies for marine ecosystems, more
- Post-brexit coastal pelagic fisheries, more
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| Datasets (11) |
Top | Publications | Projects | Datasets |
- Decrop, W., Lagaisse, R., Jonas, M., Muyle, J., Amadei Martínez, L., & Deneudt, K. (2024). LifeWatch observatory data: phytoplankton annotated trainingset by FlowCam imaging in the Belgian Part of the North Sea (Versie v1). Zenodo. https://doi.org/10.5281/zenodo.10554845, more
- Flanders Marine Institute (VLIZ), Belgium (2025): LifeWatch observatory data: phytoplankton observations by FlowCam imaging in the Belgian Part of the North Sea., more
- Lagaisse, R.; Flanders Marine Institute: Belgium; (2020): Phytoplankton biodiversity in the Belgian part of the North Sea: a microscopic and molecular inventory, more
- Lagaisse, Rune, R.; Amadei Martinez, Luz, L.; Decrop, Wout, W.; Deneudt, Klaas, K.; Muyle, Julie, J.; Mortelmans, Jonas, J.; Flanders Marine Institute (VLIZ): Belgium; (2024): LifeWatch observatory data: phytoplankton annotated image library by FlowCam imaging for the Belgian part of the North Sea. Marine Data Archive., more
- Mortelmans, J.; Lagaisse, R.; Rombouts, I., Artigas, F.; Hubert, Z.; Gallot, C.; Flanders Marine Institute: Belgium; Centre national de la recherce scientifique: France; (2020): Plankton biodiversity data from a LifeWatch/Jerico North Sea Cruise with R/V Simon Stevin in May 2022, more
- HBS GEANS: Obst M., Stæhr P., Sundberg P., Reiss H., Daraghmeh N., Axberg A., Deneudt K., Hablutzel P., Mortelmans J., Delacauw S., Lagaisse R. (2019) Hard Bottom Substrate pilot GEANS, more
- EMBRC-BE Joint Development Activity: Optimisation of in-situ sampling from ARMS in dynamic coastal environments, more
- EMO BON: European Marine Omics Biodiversity Observation Network 2021 genomic observations (18S v4, COI, ITS1F, ITS2) in the Belgian Part of the North Sea, more
- EMO BON: European Marine Omics Biodiversity Observation Network 2022 genomic observations (18S v4, COI, ITS1F, ITS2) in the Belgian Part of the North Sea, more
- EMO BON: European Marine Omics Biodiversity Observation Network 2023 genomic observations (18S v4, COI, ITS1F, ITS2) in the Belgian Part of the North Sea, more
- EMO BON: European Marine Omics Biodiversity Observation Network 2024 genomic observations (18S v4, COI, ITS1F, ITS2) in the Belgian Part of the North Sea, more
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| Publications (12) |
Top | Publications | Projects | Datasets |
| A1 Publications (5) [show] |
 Andrzej Tkacz , Anna Chiara Trano , Patrick Wincker , Nicolas Pade
(2025). First release of the European marine omics biodiversity observation network (EMO BON) shotgun metagenomics data from water and sediment samples. Biodiversity Data Journal 13: e143585. https://dx.doi.org/10.3897/BDJ.13.e143585, more- Mortelmans, J.; Semmouri, I.; Perneel, M.; Lagaisse, R.; Amadei Martínez, L.; Rommelaere, Z.; Hablützel, P.; Deneudt, K. (2024). Temperature-induced copepod depletion and the associated wax of Bellerochea in Belgian coastal waters: Implications and shifts in plankton dynamics. J. Sea Res. 201: 102523. https://dx.doi.org/10.1016/j.seares.2024.102523, more
- Perneel, M.; Lagaisse, R.; Mortelmans, J.; Maere, S.; Hablützel, P. (2024). Seasonal metabolic dynamics of microeukaryotic plankton: A year-long metatranscriptomic study in a temperate sea. mBio Online first: 1-17. https://dx.doi.org/10.1128/mbio.00383-24, more
- Santi, Ioulia; Beluche, Odette; Beraud, Mélanie; Buttigieg, Pier Luigi; Casotti, Raffaella; Cox, Cymon J.; Cunliffe, Michael; Davies, Neil; de Cerio, Oihane Diaz; Exter, Katrina; Kervella, Anne Emmanuelle; Kotoulas, Georgios; Lagaisse, Rune; Laroquette, Arnaud; Louro, Bruno; Not, Fabrice; Obst, Matthias; Pavloudi, Christina; Poulain, Julie; Præbel, Kim; Vanaverbeke, Jan; Pade, Nicolas (2023). European marine omics biodiversity observation network: A strategic outline for the implementation of omics approaches in ocean observation. Front. Mar. Sci. 10(1118120): 1-13. https://dx.doi.org/10.3389/fmars.2023.1118120, more
- Hablützel, P.I.; Rombouts, I.; Dillen, N.; Lagaisse, R.; Mortelmans, J.; Ollevier, A.; Perneel, M.; Deneudt, K. (2021). Exploring new technologies for plankton observations and monitoring of ocean health, in: Kappel, E.S. et al. Frontiers in ocean observing: Documenting ecosystems, understanding environmental changes, forecasting hazards. Oceanography, Suppl. 34(4): pp. 20-25. https://dx.doi.org/10.5670/oceanog.2021.supplement.02-09, more
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| Book [show] | |
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| Book chapter [show] |
- De Cauwer, K.; Courtens, W.; De Witte, B.; De Schrijver, C.; Degraer, S.; Deneudt, K.; Desmidt, J.; Desmit, X.; Devos, K.; Everaert, G.; Francken, F.; Haelters, J.; Hostens, K.; Kapasakali, D.; Kerckhof, F.; Kerkhove, T.; Kint, L.; Knockaert, M.; Lagaisse, R.; Legrand, S.; Maes, J.; Montereale Gavazzi, G.; Moreau, K.; Norro, A.; Ochetti, F.E.; Parmentier, K.; Podholova, P.; Ponsar, S.; Rombouts, I.; Rumes, B.; Schallier, R.; Stienen, E.; Terseleer, N.; Vanavermaete, D.; Vanermen, N.; Van de walle, M.; Van der Zande, D.; Vanhalst, K.; Van Hoey, G.; Van Lancker, V.; Van Nieuwenhove, A.; Verlé, K.; Verstraete, H. (2025). Samenvatting van de staat van het marien milieu, in: Belgische Staat Mariene Strategie Deel 1 voor de Belgische mariene wateren. Staat van Belgische mariene wateren, goede milieutoestand en milieudoelen. Kaderrichtlijn Mariene Strategie - Artikel 8, 9 en 10. pp. 11-60, more
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| Thesis [show] |
- Lagaisse, R. (2020). Phytoplankton biodiversity in the Belgian part of the North Sea: a microscopic and molecular inventory. MSc Thesis. Ghent University, Biology Department: Gent. 117 pp., more
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| Abstracts (4) [show] |
- Dujardin, J.; Perneel, M.; Lagaisse, R.; Larrinoa, N.; Mortelmans, J.; Theetaert, H.; Verbrugge, S.; Gkritzalis, T.; De Rijcke, M.; Maere, S.; Hablützel, P.I. (2024). From bloom to foam: Tracing the role of Phaeocystis in marine gel formation, in: Mees, J. et al. Book of abstracts – VLIZ Marine Science Day, 6 March 2024, Oostende. VLIZ Special Publication, 91: pp. 18-19, more
- Lagaisse, R.; Decrop, W.; Deneudt, K. (2024). AI in marine sciences: an open-access integrated environment for automated classification of phytoplankton images, in: Mees, J. et al. Book of abstracts – VLIZ Marine Science Day, 6 March 2024, Oostende. VLIZ Special Publication, 91: pp. 82, more
- Ollevier, A.; Ponsoni, L.; Develter, R.; Mortelmans, J.; Lagaisse, R.; De Troch, M.; Hablützel, P.; Boone, W. (2023). Oceanic drivers, nutrient dynamics and plankton communities in West-Greenland’s fjord system: A multidisciplinary study, in: Mees, J. et al. Book of abstracts – VLIZ Marine Science Day, 1 March 2023, Bruges. VLIZ Special Publication, 90: pp. 79, more
- Lagaisse, R.; Dillen, N.; Deneudt, K.; Hablützel, P. (2022). Working in a new era of automated classification in micro- (phyto)plankton monitoring: a FlowCAM case study, in: Mees, J. et al. Book of abstracts – VLIZ Marine Science Day, Online event 2 March 2022. VLIZ Special Publication, 88: pp. 58, more
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