IMIS | Expertplatform - Waterbouwkundig Laboratorium

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prof. dr. ir. Swings, Jean
ORCID

Vorig instituut	Top \| Publicaties \| Projecten
Universiteit Gent; Faculteit Wetenschappen; Vakgroep Biochemie en Microbiologie; Laboratorium voor Microbiologie, meer Functie: Emeritus

Projecten (7)

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Biodegradeerbaarheid van bioplastics,; prenormatief onderzoek, biorecyclage en ecologische impact, meer
Biodiversiteit van microbiële matten in Antarctica, meer
Diagnose en beheersing van bakterieziekten in penaeide garnalen ontluikingsbedrijven, meer
Hygiene bewaking en ziektevoorkoming in mariene viskultuur, vnl. door aanpassing en beheersing van de mikrobiologische omgeving, meer
Improvement of scallop (Mollusca) production in rural areas, meer
Larvicultuur van de tarbot (Scophthalmus maximus): Zoötechnische, pathologische en microbiologische aspecten, meer
Prokaryotische diversiteit in poolzeeën en Antarctische meren, meer

Publicaties (104)	Top \| Publicaties \| Projecten
A1 publicaties (75) [show]
Walter, J.M.; de Oliveira, L.S.; Tschoeke, D.A.; Meirelles, P.M.; Neves, M.H.C.B.; Batista, D.; Carvalho, A.P.; Dos Santos Costa, R.; Dobretsov, S.; Coutinho, R.; Swings, J.; Thompson, C.C.; Thompson, F.L. (2021). Metagenomic insights into ecosystem function in the microbial mats of a large hypersaline coastal lagoon system. Front. Mar. Sci. 8: 715335. https://dx.doi.org/10.3389/fmars.2021.715335, meer Salazar, V.W.; Tschoeke, D.A.; Swings, J.; Cosenza, C.A.; Mattoso, M.; Thompson, C.C.; Thompson, F.L. (2020). A new genomic taxonomy system for the Synechococcus collective. Environ. Microbiol. 22(11): 4557-4570. https://hdl.handle.net/10.1111/1462-2920.15173, meer Tschoeke, D.; Salazar, V.W.; Vidal, L.; Campeão, M.; Swings, J.; Thompson, F.; Thompson, C. (2020). Unlocking the genomic taxonomy of the Prochlorococcus collective. Microb. Ecol. 80(3): 546-558. https://hdl.handle.net/10.1007/s00248-020-01526-5, meer Campeão, M.E.; Swings, J.; Silva, B.S.; Otsuki, K.; Thompson, F.L.; Thompson, C.C. (2019). “Candidatus Colwellia aromaticivorans” sp. nov., “Candidatus Halocyntiibacter alkanivorans” sp. nov., and “Candidatus Ulvibacter alkanivorans” sp. nov. genome sequences. Microbiology Resource Announcements 8(15): e00086-19. https://dx.doi.org/10.1128/MRA.00086-19, meer Walter, J.M.; Coutinho, F.H.; Dutilh, B.E.; Swings, J.; Thompson, F.L.; Thompson, C. (2017). Ecogenomics and taxonomy of Cyanobacteria phylum. Front. Microbiol. 8: 2132. https://dx.doi.org/10.3389/fmicb.2017.02132, meer Appolinario, L.; Tschoeke, D.; Rua, C.; Venas, T.; Campeao, M.; Amaral, G.; Leomil, L.; de Oliveira, L.; Vieira, V.; Otsuki, K.; Swings, J.; Thompson, F.; Thompson, C. (2016). Description of Endozoicomonas arenosclerae sp. nov. using a genomic taxonomy approach. Antonie van Leeuwenhoek 109(3): 431-438. https://dx.doi.org/10.1007/s10482-016-0649-x, meer Meirelles, P.M.; Gadelha, L.M.R.; Francini-Filho, R.B.; de Moura, R.L.; Amado-Filho, G.M.; Bastos, A.C.; Paranhos, R.P.R.; Rezende, C.E.; Swings, J.; Siegle, E.; Asp Neto, N.E.; Leitão, S.N.; Coutinho, R.; Mattoso, M.; Salomon, P.S.; Valle, R.A.B.; Pereira, R.C.; Kruger, R.H.; Thompson, C.; Thompson, F.L. (2015). BaMBa: towards the integrated management of Brazilian marine environmental data. Database 2015: bav088. https://dx.doi.org/10.1093/database/bav088, meer Moreira, B; Duytschaever, G; Tonon, C; Froes, M; de Oliveira, S; Amado, M; Francini, B; De Vos, P.; Swings, J.; Thompson, C; Thompson, L (2014). Photobacterium sanctipauli sp. nov. isolated from bleached Madracis decactis (Scleractinia) in the St Peter & St Paul Archipelago, Mid-Atlantic Ridge, Brazil. PeerJ 2: e427. dx.doi.org/10.7717/peerj.427, meer Rojas, J.L.; Martin, J.; Tormo, J.R.; Vicente, F.; Brunati, M.; Ciciliato, I.; Losi, D.; Van Trappen, S.; Mergaert, J.; Swings, J.; Marinelli, F.; Genilloud, O. (2009). Bacterial diversity from benthic mats of Antarctic lakes as a source of new bioactive metabolites. Marine Genomics 2(1): 33-41. dx.doi.org/10.1016/j.margen.2009.03.005, meer Hidalgo, R.; Cleenwerck, I.; Balboa, S.; De Wachter, M.; Thompson, F.; Swings, J.; de Vos, P.; Romalde, J. (2008). Diversity of Vibrios associated with reared clams in Galicia (NW Spain). Syst. Appl. Microbiol. 31(3): 215-222. https://dx.doi.org/10.1016/j.syapm.2008.04.001, meer Thompson, F.L.; Cleenwerck, I.; Swings, J.; Matsuyama, J.; Iida, T. (2007). Genomic diversity and homologous recombination in Vibrio parahaemolyticus as revealed by amplified fragment length polymorphism (AFLP) and multilocus sequence analysis (MLSA). Microbes and Environments 22(4): 373-379. dx.doi.org/10.1264/jsme2.22.373, meer Tryfinopoulou, P.; Tsakalidou, E.; Vancanneyt, M.; Hoste, B.; Swings, J.; Nychas, G-J.E (2007). Diversity of Shewanella population in fish Sparus aurata harvested in the Aegean Sea. J. Appl. Microbiol. 103(3): 711-721. dx.doi.org/10.1111/j.1365-2672.2007.03355.x, meer De Mesel, I.G.; Derycke, S.; Swings, J.; Vincx, M.; Moens, T. (2006). Role of nematodes in decomposition processes: does within-trophic group diversity matter? Mar. Ecol. Prog. Ser. 321: 157-166. dx.doi.org/10.3354/meps321157, meer Nedashkovskaya, O.I.; Vancanneyt, M.; Christiaens, L.; Kalinovskaya, N.I.; Mikhailov, V.; Swings, J. (2006). Aquimarina intermedia sp. nov., reclassification of Stanierella latercula (Lewin 1969) as Aquimarina latercula comb. nov. and Gaetbulimicrobium brevivitae Yoon et al. 2006 as Aquimarina brevivitae comb. nov. and emended description of the genus Aquimarina. Int. J. Syst. Evol. Microbiol. 56: 2037-2041. dx.doi.org/10.1099/ijs.0.64155-0, meer Nedashkovskaya, O.I.; Kim, S.B.; Vancanneyt, M.; Lysenko, A.M.; Shin, D.S.; Park, M.S.; Lee, K.H.; Jung, W.J.; Kalinovskaya, N.I.; Mikhailov, V.; Bae, K.S.; Swings, J. (2006). Echinicola pacifica gen. nov., sp nov., a novel flexibacterium isolated from the sea urchin Strongylocentrotus intermedius. Int. J. Syst. Evol. Microbiol. 56: 953-958. dx.doi.org/10.1099/ijs.0.64156-0, meer Nedashkovskaya, O.I.; Kim, S.B.; Vancanneyt, M.; Shin, D.S.; Lysenko, A.M.; Shevchenko, L.S.; Krasokhin, V.B.; Mikhailov, V.; Swings, J.; Bae, K.S. (2006). Salegentibacter agarivorans sp. nov., a novel marine bacterium of the family Flavobacteriaceae isolated from the sponge Artemisina sp. Int. J. Syst. Evol. Microbiol. 56: 883-887. dx.doi.org/10.1099/ijs.0.64167-0, meer Nedashkovskaya, O.I.; Vancanneyt, M.; Cleenwerck, I.; Snauwaert, C.; Kim, S.B.; Lysenko, A.M.; Shevchenko, L.S.; Lee, K.H.; Park, M.S.; Frolova, G.M.; Mikhailov, V.; Bae, K.S.; Swings, J. (2006). Arenibacter palladensis sp. nov., a novel marine bacterium isolated from the green alga Ulva fenestrata, and emended description of the genus Arenibacter. Int. J. Syst. Evol. Microbiol. 56: 155-160. dx.doi.org/10.1099/ijs.0.63893-0, meer Nedashkovskaya, O.I.; Kim, S.B.; Vancanneyt, M.; Snauwaert, C.; Lysenko, A.M.; Rohde, M.; Frolova, G.M.; Zhukova, N.V.; Mikhailov, V.; Bae, K.S.; Oh, H.W.; Swings, J. (2006). Formosa agariphila sp. nov., a budding bacterium of the family Flavobacteriaceae isolated from marine environments, and emended description of the genus Formosa. Int. J. Syst. Evol. Microbiol. 56: 161-167. dx.doi.org/10.1099/ijs.0.63875-0, meer Thompson, F.L.; Barash, Y.; Sawabe, T.; Sharon, G.; Swings, J.; Rosenberg, E. (2006). Thalassomonas loyana sp. nov., a causative agent of the white plague-like disease of corals on the Eilat coral reef. Int. J. Syst. Evol. Microbiol. 56: 365-368. dx.doi.org/10.1099/ijs.0.63800-0, meer Austin, B.; Austin, D.; Sutherland, R.; Thompson, F.; Swings, J. (2005). Pathogenicity of vibrios to rainbow trout (Oncorhynchus mykiss, Walbaum) and Artemia nauplii. Environ. Microbiol. 7(9): 1488-1495. dx.doi.org/10.1111/j.1462-2920.2005.00847.x, meer Laursen, B.G.; Bay, L.; Cleenwerck, I.; Vancanneyt, M.; Swings, J.; Dalgaard, P.; Leisner, J. (2005). Carnobacterium divergens and Carnobacterium maltaromaticum as spoilers or protective cultures in meat and seafood: phenotypic and genotypic characterization. Syst. Appl. Microbiol. 28(2): 151-164. https://dx.doi.org/10.1016/j.syapm.2004.12.001, meer Le Roux, F.; Goubet, A.; Thompson, F.L.; Faury, N.; Gay, M.; Swings, J.; Saulnier, D. (2005). Vibrio gigantis sp. nov., isolated from the haemolymph of cultured oysters (Crassostrea gigas). Int. J. Syst. Evol. Microbiol. 55: 2251-2255. dx.doi.org/10.1099/ijs.0.63666-0, meer Moens, T.; Paiva dos Santos, G.A.; Thompson, F.L.; Swings, J.; Fonséca-Genevois, V.; Vincx, M.; De Mesel, I.G. (2005). Do nematode mucus secretions affect bacterial growth? Aquat. Microb. Ecol. 40(1): 77-83. dx.doi.org/10.3354/ame040077, meer Nedashkovskaya, O.I.; Vancanneyt, M.; Dawyndt, P.; Engelbeen, K.; Vandemeulebroecke, K.; Cleenwerck, I.; Hoste, B.; Mergaert, J.; Tan, T.-L.; Frolova, G.M.; Mikhailov, V.; Swings, J. (2005). Reclassification of [Cytophaga] marinoflava Relchenbach 1989 as Leeuwenhoekiella marinoflava gen. nov., comb. nov. and description of Leeuwenhoekiella aequorea sp. nov. Int. J. Syst. Evol. Microbiol. 55: 1033-1038. dx.doi.org/10.1099/ijs.0.63410-0, meer Nedashkovskaya, O.I.; Kim, S.B.; Han, S.K.; Snauwaert, C.; Vancanneyt, M.; Swings, J.; Kim, K.-O.; Lysenko, A.M.; Rohde, M.; Frolova, G.M.; Mikhailov, V.; Bae, K.S. (2005). Winogradskyella thalassocola gen. nov., sp. nov., Winogradskyella epiphytica sp. nov. and Winogradskyella eximia sp. nov., marine bacteria of the family Flavobactefiaceae. Int. J. Syst. Evol. Microbiol. 55: 49-55. dx.doi.org/10.1099/ijs.0.63307-0, meer Svec, P.; Vancanneyt, M.; Devriese, L.A.; Naser, S.M.; Snauwaert, C.; Lefebvre, K.; Hoste, B.; Swings, J. (2005). Enterococcus aquimarinus sp. nov., isolated from sea water. Int. J. Syst. Evol. Microbiol. 55: 2183-2187. dx.doi.org/10.1099/ijs.0.63722-0, meer Thompson, F.L.; Gevers, D.; Thompson, C.C.; Dawyndt, P.; Naser, S.; Hoste, B.; Munn, C.B.; Swings, J. (2005). Phylogeny and molecular identification of vibrios on the basis of multilocus sequence analysis. Appl. Environ. Microbiol. 71(9): 5107-5115. dx.doi.org/10.1128/AEM.71.9.5107-5115.2005, meer Thompson, F.L.; Thompson, C.C.; Naser, S.; Hoste, B.; Vandemeulebroecke, K.; Munn, C.; Bourne, D.; Swings, J. (2005). Photobacterium rosenbergii sp. nov. and Enterovibrio coralii sp. nov., vibrios associated with coral bleaching. Int. J. Syst. Evol. Microbiol. 55: 913-917. dx.doi.org/10.1099/ijs.0.63370-0, meer Abraham, W.-R.; Strömpl, C.; Vancanneyt, M.; Bennasar, A.; Swings, J.; Lünsdorf, H.; Smit, J.; Moore, E.R.B. (2004). Woodsholea maritima gen. nov., sp nov., a marine bacterium with a low diversity of polar lipids. Int. J. Syst. Evol. Microbiol. 54: 1227-1234. dx.doi.org/10.1099/ijs.0.02943-0, meer De Mesel, I.G.; Derycke, S.; Moens, T.; Van der Gucht, K.; Vincx, M.; Swings, J. (2004). Top-down impact of bacterivorous nematodes on the bacterial community structure: a microcosm study. Environ. Microbiol. 6(7): 733-744. http://dx.doi.org/10.1111/j.1462-2920.2004.00610.x, meer Faury, N.; Saulnier, D.; Thompson, F.L.; Gay, M.; Swings, J.; Le Roux, F. (2004). Vibrio crassostreae sp. nov., isolated from the haemolymph of oysters (Crassostrea gigas). Int. J. Syst. Evol. Microbiol. 54: 2137-2140. dx.doi.org/10.1099/ijs.0.63232-0, meer Gomez-Gil, B.; Thompson, F.L.; Thompson, C.C.; Garcia-Gasca, A.; Roque, A.; Swings, J. (2004). Vibrio hispanicus sp. nov., isolated from Artemia sp. and sea water in Spain. Int. J. Syst. Evol. Microbiol. 54: 261-265. dx.doi.org/10.1099/ijs.0.02775-0, meer Nedashkovskaya, O.I.; Suzuki, M.; Lysenko, A.M.; Snauwaert, C.; Vancanneyt, M.; Swings, J.; Vysotskii, M.V.; Mikhailov, V. (2004). Cellullophaga pacifica sp. nov. Int. J. Syst. Evol. Microbiol. 54: 609-613. dx.doi.org/10.1099/ijs.0.02737-0, meer Nedashkovskaya, O.I.; Suzuki, M.; Vancanneyt, M.; Cleenwerck, I.; Lysenko, A.M.; Mikhailov, V.; Swings, J. (2004). Zobellia amurskyensis sp. nov., Zobellia laminariae sp. nov. and Zobellia russellii sp. nov., novel marine bacteria of the family Flavobactenaceae. Int. J. Syst. Evol. Microbiol. 54: 1643-1648. dx.doi.org/10.1099/ijs.0.63091-0, meer Nedashkovskaya, O.I.; Vancanneyt, M.; Van Trappen, S.; Vandemeulebroecke, K.; Lysenko, A.M.; Rohde, M.; Falsen, E.; Frolova, G.M.; Mikhailov, V.; Swings, J. (2004). Description of Algoriphagus aquimarinus sp. nov., Algoriphagus chordae sp. nov. and Algoriphagus winogradskyi sp. nov., from sea water and algae, transfer of Hongiella halophile Yi and Chun 2004 to the genus Algoriphagus as Algoriphagus halophilus comb. nov. and emended descriptions of the genera Algoriphagus Bowman et al. 2003 and Hongiella Yi and Chun 2004. Int. J. Syst. Evol. Microbiol. 54: 1757-1764. dx.doi.org/10.1099/ijs.0.02915-0, meer Nedashkovskaya, O.I.; Suzuki, M.; Vancanneyt, M.; Cleenwerck, I.; Zhukova, N.V.; Vysotskii, M.V.; Mikhailov, V.; Swings, J. (2004). Salegentibacter holothuriorum sp. nov., isolated from the edible holothurian Apostichopus japonicus. Int. J. Syst. Evol. Microbiol. 54: 1107-1110. dx.doi.org/10.1099/ijs.0.02987-0, meer Sawabe, T.; Hayashi, K.; Moriwaki, J.; Fukui, Y.; Thompson, F.L.; Swings, J.; Christen, R. (2004). Vibrio neonatus sp. nov. and Vibrio ezurae sp. nov. Isolated from the Gut of Japanese Abalones. Syst. Appl. Microbiol. 27(5): 527-534. https://dx.doi.org/10.1078/0723202041748154, meer Sawabe, T.; Hayashi, K.; Moriwaki, J.; Thompson, F.L.; Swings, J.; Potin, P.; Christen, R.; Ezura, Y. (2004). Vibrio gallicus sp. nov., isolated from the gut of the French abalone Haliotis tuberculata. Int. J. Syst. Evol. Microbiol. 54: 843-846. dx.doi.org/10.1099/ijs.0.02804-0, meer Thompson, F.L.; Iida, T.; Swings, J. (2004). Biodiversity of Vibrios. Microbiol. Mol. Biol. Rev. 68(3): 403-431. http://dx.doi.org/10.1128/MMBR.68.3.403-431.2004, meer Van Trappen, S.; Tan, T.-L.; Yang, J.; Mergaert, J.; Swings, J. (2004). Alteromonas stellipolaris sp. nov., a novel, budding, prosthecate bacterium from Antarctic seas, and emended description of the genus Alteromonas. Int. J. Syst. Evol. Microbiol. 54: 1157-1163. dx.doi.org/10.1099/ijs.0.02862-0, meer Van Trappen, S.; Tan, T.-L.; Yang, J.; Mergaert, J.; Swings, J. (2004). Glaciecola polaris sp. nov., a novel budding and prosthecate bacterium from the Arctic Ocean, and emended description of the genus Glaciecola. Int. J. Syst. Evol. Microbiol. 54: 1765-1771. dx.doi.org/10.1099/ijs.0.63123-0, meer Ben-Haim, Y.; Thompson, F.L.; Thompson, C.C.; Cnockaert, M.; Hoste, B.; Swings, J.; Rosenberg, E. (2003). Vibrio coralliilyticus sp. nov., a temperature-dependent pathogen of the coral Pocillopora damicornis. Int. J. Syst. Evol. Microbiol. 53(1): 309-315. http://dx.doi.org/10.1099/ijs.0.02402-0, meer Berry, A.; Janssens, D.; Hümbelin, M.; Jore, J.P.M.; Hoste, B.; Cleenwerck, I.; Vancanneyt, M.; Bretzel, W.; Mayer, A.F.; Lopez-Ulibarri, R.; Shanmugam, B.; Swings, J.; Pasamontes, L. (2003). Paracoccus zeaxanthinifaciens sp. nov., a zeaxanthin-producing bacterium. Int. J. Syst. Evol. Microbiol. 53: 231-238. dx.doi.org/10.1099/ijs.0.02368-0, meer De Mesel, I.G.; Derycke, S.; Swings, J.; Vincx, M.; Moens, T. (2003). Influence of bacterivorous nematodes on the decomposition of cordgrass. J. Exp. Mar. Biol. Ecol. 296(2): 227-242. https://dx.doi.org/10.1016/s0022-0981(03)00338-1, meer Godoy, F.; Vancanneyt, M.; Martinez, M.; Steinbuchel, A.; Swings, J.; Rehm, B.H.A. (2003). Sphingopyxis chilensis sp. nov., a chlorophenol-degrading bacterium that accumulates polyhydroxyalkanoate, and transfer of Sphingomonas alaskensis to Sphingopyxis alaskensis comb. nov. Int. J. Syst. Evol. Microbiol. 53: 473-477. dx.doi.org/10.1099/ijs.0.02375-0, meer Gomez-Gil, B.; Thompson, F.L.; Thompson, C.C.; Swings, J. (2003). Vibrio rotiferianus sp. nov., isolated from cultures of the rotifer Brachionus plicatilis. Int. J. Syst. Evol. Microbiol. 53(1): 239-243. https://dx.doi.org/10.1099/ijs.0.02430-0, meer Hayashi, K.; Moriwaki, J.; Sawabe, T.; Thompson, F.L.; Swings, J.; Gudkovs, N.; Christen, R.; Ezura, Y. (2003). Vibrio superstes sp. nov., isolated from the gut of Australian abalones Haliotis laevigata and Haliotis rubra. Int. J. Syst. Evol. Microbiol. 53: 1813-1817. dx.doi.org/10.1099/ijs.0.02625-0, meer Thompson, F.L.; Hoste, B.; Vandemeulebroecke, K.; Swings, J. (2003). Reclassification of Vibrio hollisae as Grimontia hollisae gen. nov., comb. nov. Int. J. Syst. Evol. Microbiol. 53(5): 1615-1617. http://dx.doi.org/10.1099/ijs.0.02660-0, meer Thompson, F.L.; Thompson, C.C.; Hoste, B.; Vandemeulebroecke, K.; Gullian, M.; Swings, J. (2003). Vibrio fortis sp. nov. and Vibrio hepatarius sp. nov., isolated from aquatic animals and the marine environment. Int. J. Syst. Evol. Microbiol. 53(5): 1495-1501. https://dx.doi.org/10.1099/ijs.0.02658-0, meer Thompson, F.L.; Thompson, C.C.; Li, Y.; Gomez-Gil, B.; Vandenberghe, J.; Hoste, B.; Swings, J. (2003). Vibrio kanaloae sp. nov., Vibrio pomeroyi sp. nov. and Vibrio chagasii sp. nov., from sea water and marine animals. Int. J. Syst. Evol. Microbiol. 53(1): 753-759. https://dx.doi.org/10.1099/ijs.0.02490-0, meer Thompson, F.L.; Thompson, C.C.; Swings, J. (2003). Vibrio tasmaniensis sp. nov., isolated from Atlantic salmon (Salmo salar L.). Syst. Appl. Microbiol. 26(1): 65-69. https://dx.doi.org/10.1078/072320203322337326, meer Thompson, F.L.; Li, Y.; Gomez-Gil, B.; Thompson, C.C.; Hoste, B.; Vandemeulebroecke, K.; Rupp, G.S.; Pereira, A.; De Bem, M.M.; Sorgeloos, P.; Swings, J. (2003). Vibrio neptunius sp. nov., Vibrio brasiliensis sp. nov. and Vibrio xuii sp. nov., isolated from the marine aquaculture environment (bivalves, fish, rotifers and shrimps). Int. J. Syst. Evol. Microbiol. 53: 245-252. dx.doi.org/10.1099/ijs.0.02447-0, meer Vandenberghe, J.; Thompson, F.L.; Gomez-Gil, B.; Swings, J. (2003). Phenotypic diversity amongst Vibrio isolates from marine aquaculture systems. Aquaculture 219(1-4): 9-20. https://dx.doi.org/10.1016/s0044-8486(02)00312-5, meer Abraham, W.-R.; Strömpl, C.; Bennasar, A.; Vancanneyt, M.; Snauwaert, C.; Swings, J.; Smit, J.; Moore, E.R.B. (2002). Phylogeny of Maricaulis Abraham et al. 1999 and proposal of Maricaulis virginensis sp. nov., M. parjimensis sp. nov., M. washingtonensis sp. nov. and M. salignorans sp. nov. Int. J. Syst. Evol. Microbiol. 52: 2191-2201. dx.doi.org/10.1099/00207713-52-6-2191, meer Sawabe, T.; Thompson, F.L.; Heyrman, J.; Cnockaert, M.; Hayashi, K.; Tanaka, R.; Yoshimizu, M.; Hoste, B.; Swings, J.; Ezura, Y. (2002). Fluorescent amplified fragment length polymorphism and repetitive extragenic palindrome-PCR fingerprinting reveal host-specific genetic diversity of Vibrio halioticoli-like strains isolated from the gut of Japanese abalone. Appl. Environ. Microbiol. 68(8): 4140-4144. https://dx.doi.org/10.1128/AEM.68.8.4140-4144.2002, meer Thompson, F.L.; Hoste, B.; Vandemeulebroecke, K.; Engelbeen, K.; Denis, R.; Swings, J. (2002). Vibrio trachuri Iwamoto et al. 1995 is a junior synonym of Vibrio harveyi (Johnson and Shunk 1936) Baumann et al. 1981. Int. J. Syst. Evol. Microbiol. 52: 973-976. https://dx.doi.org/10.1099/00207713-52-3-973, meer Thompson, F.L.; Hoste, B.; Thompson, C.C.; Goris, J.; Gomez-Gil, B.; Huys, L.; de Vos, P.; Swings, J. (2002). Enterovibrio norvegicus gen. nov., sp. nov., isolated from the gut of turbot (Scophthalmus maximus) larvae: a new member of the family Vibrionaceae. Int. J. Syst. Evol. Microbiol. 52(6): 2015-2022. https://dx.doi.org/10.1099/00207713-52-6-2015, meer Huys, L.; Dhert, P.; Robles, R.; Ollevier, F.P.; Sorgeloos, P.; Swings, J. (2001). Search for beneficial bacterial strains for turbot (Scophthalmus maximus L.) larviculture. Aquaculture 193(1-2): 25-37. dx.doi.org/10.1016/S0044-8486(00)00474-9, meer Mergaert, J.; Verhelst, A.; Cnockaert, M.C.; Tan, T.-L.; Swings, J. (2001). Characterization of facultative oligotrophic bacteria from polar seas by analysis of their fatty acids and 16S rDNA sequences. Syst. Appl. Microbiol. 24(1): 98-107. https://dx.doi.org/10.1078/0723-2020-00012, meer Thompson, F.L.; Hoste, B.; Thompson, C.C.; Huys, G.; Swings, J. (2001). The coral bleaching Vibrio shiloi Kushmaro et al. 2001 is a later synonym of Vibrio mediterranei Pujalte and Garay 1986. Syst. Appl. Microbiol. 24(4): 516-519. https://dx.doi.org/10.1078/0723-2020-00065, meer Thompson, F.L.; Hoste, B.; Vandemeulebroecke, K.; Swings, J. (2001). Genomic diversity amongst Vibrio isolates from different sources determined by fluorescent amplified fragment length polymorphism. Syst. Appl. Microbiol. 24(4): 520-538. https://dx.doi.org/10.1078/0723-2020-00067, meer Vancanneyt, M.; Schut, F.; Snauwaert, C.; Goris, J.; Swings, J.; Gottschal, J.C. (2001). Sphingomonas alaskensis sp nov., a dominant bacterium from a marine oligotrophic environment. Int. J. Syst. Evol. Microbiol. 51: 73-80. https://hdl.handle.net/10.1099/00207713-51-1-73, meer Benediktsdóttir, E.; Verdonck, L.; Sproer, C.; Helgason, S.; Swings, J. (2000). Characterization of Vibrio viscosus and Vibrio wodanis isolated at different geographical locations: a proposal for reclassification of Vibrio viscosus as Moritella viscosa comb. nov. Int. J. Syst. Evol. Microbiol. 50: 479-488. https://dx.doi.org/10.1099/00207713-50-2-479, meer Neyts, K.; Huys, G.; Uyttendaele, M.; Swings, J.; Debevere, J. (2000). Incidence and identification of mesophilic Aeromonas spp. from retail foods. Letters in Applied Microbiology 31(5): 359-363. https://dx.doi.org/10.1046/j.1472-765x.2000.00828.x, meer Moens, T.; Verbeeck, L.; de Mayer, A.; Swings, J.; Vincx, M. (1999). Selective attraction of marine bacterivorous nematodes to their bacterial food. Mar. Ecol. Prog. Ser. 176: 165-178, meer Vandenberghe, J.; Verdonck, L.; Robles-Arozarena, R.; Rivera, G.; Bolland, A.; Balladares, M.; Gomez-Gil, B.; Calderon, J.; Sorgeloos, P.; Swings, J. (1999). Vibrios associated with Litopenaeus vannamei larvae, postlarvae, broodstock, and hatchery probionts. Appl. Environ. Microbiol. 65(6): 2592-2597, meer Shiri Harzevili, A.R.; Van Duffel, H.; Dhert, Ph.; Swings, J.; Sorgeloos, P. (1998). Use of a potential probiotic Lactococcus lactis AR21 strain for the enhancement of growth in the rotifer Brachionus plicatilis (Müller). Aquac. Res. 29(6): 411-417. dx.doi.org/10.1046/j.1365-2109.1998.00217.x, meer Vandenberghe, J.; Li, Y.; Verdonck, L.; Li, J.; Sorgeloos, P.; Xu, H.S.; Swings, J. (1998). Vibrios associated with Penaeus chinensis (Crustacea: Decapoda) larvae in Chinese shrimp hatcheries. Aquaculture 169: 121-132. https://dx.doi.org/10.1016/S0044-8486(98)00319-6, meer Arias, C.R.; Verdonck, L.; Swings, J.; Aznar, R.; Garay, E. (1997). A polyphasic approach to study the intraspecific diversity amongst Vibrio vulnificus isolates. Syst. Appl. Microbiol. 20(4): 622-633, meer Arias, C.R.; Verdonck, L.; Swings, J.; Garay, E.; Aznar, R. (1997). Intraspecific differentiation of Vibrio vulnificus biotypes by amplified fragment length polymorphism and ribotyping. Appl. Environ. Microbiol. 63(7): 2600-2606, meer Grisez, L.; Reyniers, J.; Verdonck, L.; Swings, J.; Ollevier, F. (1997). Dominant intestinal microflora of sea bream and sea bass larvae, from two hatcheries, during larval development. Aquaculture 155(1-4): 387-399. https://dx.doi.org/10.1016/S0044-8486(97)00113-0, meer Shiri Harzevili, A.R.; Van Duffel, H.; Defoort, T.; Dhert, P.; Sorgeloos, P.; Swings, J. (1997). The influence of a selected bacterial strain Vibrio anguillarum TR 27 on the growth rate of rotifers in different culture conditions. Aquacult. Int. 5(2): 183-188, meer Verdonck, L.; Grisez, L.; Sweetman, E.; Minkoff, G.; Sorgeloos, P.; Ollevier, F.P.; Swings, J. (1997). Vibrios associated with routine productions of Brachionus plicatilis. Aquaculture 149(3-4): 203-214. http://dx.doi.org/10.1016/S0044-8486(96)01451-2, meer Kühn, I.; Austin, B.; Austin, D.A.; Blanch, A.R.; Grimont, P.A.D.; Jofre, J.; Koblavi, S.; Larsen, J.L.; Möllby, R.; Pedersen, K.; Tiainen, T.; Verdonck, L.; Swings, J. (1996). Diversity of Vibrio anguillarum isolates from different geographical and biological habitats, determined by the use of a combination of eight different typing methods. Syst. Appl. Microbiol. 19(3): 442-450. http://dx.doi.org/10.1016/s0723-2020(96)80075-0, meer Verdonck, L.; Swings, J.; Kersters, K.; Dehasque, M.; Sorgeloos, P.; Léger, P. (1994). Variability of the microbial environment of rotifer Brachionus plicatilis and Artemia production systems. J. World Aquacult. Soc. 25(1): 55-59, meer
Peer reviewed publicaties (3) [show]
Berrada, I.; Willems, A.; De Vos, P.; El Fahime, E.; Swings, J.; Bendaou, N.; Melloul, M.; Amar, M. (2012). Diversity of culturable moderately halophilic and halotolerant bacteria in a marsh and two salterns a protected ecosystem of Lower Loukkos (Morocco). Afr. J. Microbiol. Res. 6(10): 2419-2434. dx.doi.org/10.5897/AJMR-11-1490, meer Hisbi, D.; Vandenberghe, J.; Robles, R.; Verdonck, L.; Swings, J.; Sorgeloos, P. (2000). Characterisation of Vibrio and related bacteria associated with shrimp Penaeus monodon larvae in Indonesia. Asian Fish. Sci. 13: 57-64, meer Thyssen, A.; Van Eygen, S.; Hauben, L.; Goris, J.; Swings, J.; Ollevier, F.P. (2000). Application of AFLP for taxonomic and epidemiological studies of Photobacterium damselae subsp. piscicida. Int. J. Syst. Bacteriol. 50: 1013-1019, meer
Boekhoofdstukken (25) [show]
De Mesel, I.G.; Derycke, I.; Swings, J.; Vincx, M.; Moens, T. (2004). Effect of nematode diversity on organic matter decomposition and the associated microbial community: a microcosm study, in: De Mesel, I.G. Nematoden geassocieerd met fytodetritus in schorren: kolonisatiepatronen en soort- en diversiteitsafhankelijke invloed op afbraakprocessen = Nematodes associated with phytodetritus in salt marshes: colonization patterns and species- and diversity related impacts on decomposition processes. pp. 53-79, meer De Mesel, I.G.; Derycke, S.; Moens, T.; Van der Gucht, K.; Vincx, M.; Swings, J. (2004). Top-down impact of bacterivorous nematodes on the bacterial community structure: a microcosm study, in: De Mesel, I.G. Nematoden geassocieerd met fytodetritus in schorren: kolonisatiepatronen en soort- en diversiteitsafhankelijke invloed op afbraakprocessen = Nematodes associated with phytodetritus in salt marshes: colonization patterns and species- and diversity related impacts on decomposition processes. pp. 32-52, meer Ben-Haim, Y.; Thompson, F.L.; Thompson, C.C.; Cnockaert, M.; Hoste, B.; Swings, J.; Rosenberg, E. (2003). Vibrio coralliilyticus sp. nov., a temperature-dependent pathogen of the coral Pocillopora damicornis, in: Thompson, F.L. Improved taxonomy of the family Vibrionaceae. pp. 135-145, meer De Mesel, I.G.; Derycke, S.; Swings, J.; Vincx, M.; Moens, T. (2003). Influence of bacterivorous nematodes on the decomposition of cordgrass, in: De Mesel, I.G. (2004). Nematoden geassocieerd met fytodetritus in schorren: kolonisatiepatronen en soort- en diversiteitsafhankelijke invloed op afbraakprocessen = Nematodes associated with phytodetritus in salt marshes: colonization patterns and species- and diversity related impacts on decomposition processes. pp. 10-29, meer Gomez-Gil, B.; Thompson, F.L.; Thompson, C.C.; Swings, J. (2003). Vibrio rotiferianus sp. nov., isolated from cultures of the rotifer Brachionus plicatilis, in: Thompson, F.L. Improved taxonomy of the family Vibrionaceae. pp. 183-189, meer Gomez-Gil, B.; Thompson, F.L.; Thompson, C.C.; Garcia-Gasca, A.; Roque, A.; Swings, J. (2003). Vibrio hispanicus sp nov., isolated from Artemia sp. and seawater in Spain, in: Thompson, F.L. Improved taxonomy of the family Vibrionaceae. pp. 165-172, meer Gomez-Gil, B.; Thompson, F.L.; Thompson, C.C.; Swings, J. (2003). Vibrio pacinii sp. nov., a new species isolated from cultured aquatic organisms, in: Thompson, F.L. Improved taxonomy of the family Vibrionaceae. pp. 173-181, meer Gomez-Gil, B.; Thompson, F.L.; Swings, J. (2003). Molecular identification of V. campbellii and V. harveyi isolates associated with disease in aquatic organisms, in: Thompson, F.L. Improved taxonomy of the family Vibrionaceae. pp. 87-92, meer Hayashi, K.; Moriwaki, J.; Sawabe, T.; Thompson, F.L.; Swings, J.; Gudkovs, N.; Christen, R.; Ezura, Y. (2003). Vibrio superstes sp. nov., isolated from the gut of Australian abalones Haliotis laevigata and Haliotis rubra, in: Thompson, F.L. Improved taxonomy of the family Vibrionaceae. pp. 191-196, meer Sawabe, T.; Hayashi, K.; Moriwaki, J.; Thompson, F.L.; Swings, J.; Potin, P.; Kloareg, B.; Christen, R.; Ezura, Y. (2003). Vibrio gallicus sp nov., isolated from the gut of French abalone Haliotis tuberculata, in: Thompson, F.L. Improved taxonomy of the family Vibrionaceae. pp. 159-163, meer Thompson, F.L.; Hoste, B.; Vandemeulebroecke, K.; Swings, J. (2003). Reclassification of V. hollisae as Grimontia hollisae gen. nov., comb. nov., in: Thompson, F.L. Improved taxonomy of the family Vibrionaceae. pp. 205-210, meer Thompson, F.L.; Thompson, C.C.; Swings, J. (2003). Vibrio tasmaniensis sp. nov., isolated from Atlantic salmon (Salmo salar L.), in: Thompson, F.L. Improved taxonomy of the family Vibrionaceae. pp. 197-204, meer Thompson, F.L.; Hoste, B.; Vandemeulebroecke, K.; Engelbeen, K.; Denis, R.; Swings, J. (2003). Vibrio trachuri Iwamoto et al. 1995 is a junior synonym of Vibrio harveyi (Johnson and Shunk 1936) Baumann et al. 1981, in: Thompson, F.L. Improved taxonomy of the family Vibrionaceae. pp. 217-222, meer Thompson, F.L.; Thompson, C.C.; Hoste, B.; Vandemeulebroecke, K.; Gullian, M.; Swings, J. (2003). Vibrio fortis sp. nov. and Vibrio hepatarius sp. nov., isolated from aquatic animals and the marine environment, in: Thompson, F.L. Improved taxonomy of the family Vibrionaceae. pp. 147-158, meer Thompson, F.L.; Thompson, C.C.; Li, Y.; Gomez-Gil, B.; Vandenberghe, J.; Hoste, B.; Swings, J. (2003). Vibrio kanaloae sp. nov., Vibrio pomeroyi sp. nov. and Vibrio chagasii sp. nov., from sea water and marine animals, in: Thompson, F.L. Improved taxonomy of the family Vibrionaceae. pp. 123-134, meer Vandenberghe, J.; Thompson, F.L.; Gomez-Gil, B.; Swings, J. (2003). Phenotypic diversity amongst Vibrio isolates from marine aquaculture systems, in: Thompson, F.L. Improved taxonomy of the family Vibrionaceae. pp. 39-50, meer Sawabe, T.; Thompson, F.L.; Heyrman, J.; Cnockaert, M.; Hayashi, K.; Tanaka, R.; Yoshimizu, M.; Hoste, B.; Swings, J.; Ezura, Y. (2002). Fluorescent amplified fragment length polymorphism and repetitive extragenic palindrome-PCR fingerprinting reveal host-specific genetic diversity of Vibrio halioticoli-like strains isolated from the gut of Japanese abalone, in: Thompson, F.L. (2003). Improved taxonomy of the family Vibrionaceae. pp. 69-76, meer Thompson, F.L.; Hoste, B.; Thompson, C.C.; Goris, J.; Gomez-Gil, B.; Huys, L.; de Vos, P.; Swings, J. (2002). Enterovibrio norvegicus gen. nov., sp. nov., isolated from the gut of turbot (Scophthalmus maximus) larvae: a new member of the family Vibrionaceae, in: Thompson, F.L. (2003). Improved taxonomy of the family Vibrionaceae. pp. 95-107, meer Thompson, F.L.; Hoste, B.; Vandemeulebroecke, K.; Swings, J. (2001). Genomic diversity amongst Vibrio isolates from different sources determined by fluorescent amplified fragment length polymorphism, in: Thompson, F.L. (2003). Improved taxonomy of the family Vibrionaceae. pp. 51-65, meer Thompson, F.L.; Hoste, B.; Thompson, C.C.; Huys, G.; Swings, J. (2001). The coral bleaching Vibrio shiloi Kushmaro et al. 2001 is a later synonym of Vibrio mediterranei Pujalte and Garay 1986, in: Thompson, F.L. (2003). Improved taxonomy of the family Vibrionaceae. pp. 211-216, meer Vandenberghe, J.; Thompson, F.L.; Swings, J. (2001). Phenotypic diversity amongst Vibrio isolates from marine aquaculture, in: Hendry, C.I. et al. (Ed.) Larvi 2001: 3rd fish and shellfish larviculture symposium Gent, Belgium, September 3-6, 2001. Special Publication European Aquaculture Society, 30: pp. 622-623, meer Shiri Harzevili, A.R.; Van Duffel, H.; Defoort, T.; Sorgeloos, P.; Swings, J. (1995). The influence of a selected bacterial strain Vibrio anguillarum TR27 on the growth rate of the rotifer, Brachionus plicatilis in two culture conditions, in: Lavens, P. et al. (Ed.) Larvi '95: Fish & Shellfish Symposium, Gent, Belgium, September 3-7, 1995. EAS Special Publication, 24: pp. 480-483, meer Verdonck, L.; Swings, J.; Sorgeloos, P. (1995). Characterization and possible role of the Vibrio flora involved in marine larviculture, in: Lavens, P. et al. (Ed.) Larvi '95: Fish & Shellfish Symposium, Gent, Belgium, September 3-7, 1995. EAS Special Publication, 24: pp. 492, meer Dehasque, M.; Verdonck, L.; Sorgeloos, P.; Swings, J.; Léger, P.; Kersters, K. (1991). Determination of the bacterial contamination in live food production systems in marine fish hatcheries in southern Europe, in: Lavens, P. et al. (Ed.) Larvi '91. Short communications and abstracts of contributions presented at the international Symposium on Fish and Crustacean Larviculture. Gent, Belgium, August 27-30, 1991. EAS Special Publication, 15: pp. 399-402, meer Verdonck, L.; Dehasque, M.; Swings, J.; Sorgeloos, P.; Léger, Ph. (1991). The microbial environment of rotifer (Brachionus plicatilis) and Artemia production systems, in: Lavens, P. et al. (Ed.) Larvi '91. Short communications and abstracts of contributions presented at the international Symposium on Fish and Crustacean Larviculture. Gent, Belgium, August 27-30, 1991. EAS Special Publication, 15: pp. 398, meer
Thesis (co-)promotor [show]
Van Trappen, S. (2004). Biodiversity of bacterial isolates from Antarctic lakes and polar seas. PhD Thesis. Universiteit Gent. Faculteit Wetenschappen: Gent. 312, ill. pp., meer

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