IMIS | Expertplatform - Waterbouwkundig Laboratorium

Publicaties | Personen | Instituten | Projecten

prof. dr. Middelburg, Jack
ORCID ResearcherID Instituut homepage

Instituut	Top \| Instituut \| Publicaties \| Projecten \| Datasets
Universiteit Utrecht; Faculteit Geowetenschappen, meer Institutioneel adres: Budapestlaan 4 3584 CD Utrecht Netherlands

Vorig instituut	Top \| Instituut \| Publicaties \| Projecten \| Datasets
Koninklijk Nederlands Instituut voor Onderzoek der Zee; Estuarine and Delta Systems (EDS), meer Functie: Departementshoofd/Werkgroepleider

Projecten (16)

Top | Instituut | Publicaties | Projecten | Datasets

Balans der heterotrofe en autotrofe processen in het schelde estuarium en impact op de koolstof- en stikstof-stromen, meer
Biogas transfer in Estuaries, meer
Biogeochemische cycli in open oceanen, kustzeeën en estuaria, meer
Biogeochemische processen in estuariene systemen, meer
COastal SAnds as Biocatalytical Filters, meer
De functionele rol van het mariene macrobenthos in het metabolisme van de zeebodem., meer
De functionele rol van nematoden en foraminiferen in het benthische metabolisme, meer
De rol van zoetwaterschorren in de vastlegging en omzettingen van stikstof in estuaria : een ecosysteem 15N labelings studie, meer
Koolstof en stikstof cycli in de Westerschelde, meer
Koolstof en stikstof cycli in de Westerschelde : het ontwikkelen van een geïntegreerde visie en de identificatie van de belangrijkste organismen in die cycli, meer
Koolstof- en stikstofcycli in het Schelde-estuarium: naar een geïntegreerde visie en een identificatie van de belangrijke spelers, meer
Nutrients Cycling and the Trophic Status of Coastal Ecosystems, meer
The development of early diagenetic models, meer
Understanding benthic, pelagic and air-borne ecosystem interactions in shallow coastal seas, meer
Voedsel, zuurstof en bioturbatie: een experimentele studie van de structuur van meiofaunagemeenschappen, meer
Zoetwaterschorren als "sinks" voor stikstof: dynamiek van het benthische compartiment en het onderzoek naar hun rol in estuariene stikstofretentie, meer

Datasets (7)	Top \| Instituut \| Publicaties \| Projecten \| Datasets
Data [show]
Andersson M., Middelburg J. 2003: Nitrogen cycling in the Westerschelde Estuary in 2003. Netherlands Institute of Ecology; Centre for Estuarine and Marine Ecology, Netherlands. Metadata available at http://mda.nioo.knaw.nl/imis.php?module=dataset&dasid=1760, meer ALGBAC: Middelburg J., Soetaert K. 2000: 13C label transfer from algae to bacteria. Netherlands Institute of Ecology; Centre for Estuarine and Marine Ecology, Netherlands. Metadata available at http://mda.nioo.knaw.nl/imis.php?module=dataset&dasid=1218, meer
Other [show]
Middelburg J. 1997: Publication data from Jack Middelburg for BIOGEST (methane data). Netherlands Institute of Ecology; Centre for Estuarine and Marine Ecology, Netherlands. Metadata available at http://mda.nioo.knaw.nl/imis.php?module=dataset&dasid=1815, meer Middelburg J. 1998: Publication data from Jack Middelburg for BIOGEST (particulate del13C, del15N, POC, PON, DOC, N2O and nitrogen uptake data). Netherlands Institute of Ecology; Centre for Estuarine and Marine Ecology, Netherlands. Metadata available at http://mda.nioo.knaw.nl/imis.php?module=dataset&dasid=1811, meer Middelburg J. 1999: Publication data from Jack Middelburg for BIOGEST (Nitrogen isotope tracing). Netherlands Institute of Ecology; Centre for Estuarine and Marine Ecology, Netherlands. Metadata available at http://mda.nioo.knaw.nl/imis.php?module=dataset&dasid=1813, meer Middelburg J. 1999: Publication data from Jack Middelburg for BIOGEST (nitrogen uptake data). Netherlands Institute of Ecology; Centre for Estuarine and Marine Ecology, Netherlands. Metadata available at http://mda.nioo.knaw.nl/imis.php?module=dataset&dasid=1816, meer Middelburg J., Herman P. 1991: Data set on pore-water composition and sediment-air fluxes in the Scheldt estuary at 9 stations with seasonal resolution. Intertidal sediments. Netherlands Institute of Ecology; Centre for Estuarine and Marine Ecology, Netherlands. Metadata available at http://mda.nioo.knaw.nl/imis.php?module=dataset&dasid=1823, meer

Publicaties (306)	Top \| Instituut \| Publicaties \| Projecten \| Datasets
A1 publicaties (217) [show]
Khojah, B.; Sadeghi, S.; Polerecky, L.; Middelburg, J.J.; Van Oevelen, D.; van der Meer, M.T.J.; Behrends, T (2025). Exploring carbon dynamics in a slow sand filter using stable isotopes. Wat. Res. 276: 123249. https://dx.doi.org/10.1016/j.watres.2025.123249, meer Khojah, B.; Sadeghi, S.; Polerecky, L.; Middelburg, J.; Van Oevelen, D.; van der Meer, M.T.J.; Behrends, T (2025). Organic carbon uptake and mineralization in slow sand filters and their relation to process variables. Journal of Water Process Engineering 77: 108396. https://dx.doi.org/10.1016/j.jwpe.2025.108396, meer Trapp-Müller, G.; Caves Rugenstein, J.K.; Conley, D.J.; Geilert, S.; Hagens, M.; Hong, W.-L.; Jeandel, C.; Longman, J.; Mason, P.R.D.; Middelburg, J.J.; Milliken, K.L.; Navarre-Sitchler, A.; Planavsky, N.J.; Reichart, G.-J.; Slomp, C.P.; Sluijs, A.; Van Hinsbergen, D.J.J.; Zhang, X. (2025). Earth’s silicate weathering continuum. Nature Geoscience 18(8): 691-701. https://dx.doi.org/10.1038/s41561-025-01743-y, meer van de Mortel, H.; Delaigue, L.; Humphreys, M.P.; Middelburg, J.J; Ossebaar, S.; Bakker, K.; Alexandre, J.P.T.; van Leeuwen-Tolboom, A.W.E.; Wolthers, M.; Sulpis, O. (2024). Laboratory observation of the buffering effect of aragonite dissolution at the seafloor. JGR: Biogeosciences 129(2): e2023JG007581. https://dx.doi.org/10.1029/2023jg007581, meer Wang, C.; Qiu, Y.; Hao, Z.; Wang, J.; Zhang, C.; Middelburg, J.J.; Wang, Y.; Zou, X. (2024). Global patterns of organic carbon transfer and accumulation across the land–ocean continuum constrained by radiocarbon data. Nature Geoscience 17(8): 778-786. https://dx.doi.org/10.1038/s41561-024-01476-4, meer Cramwinckel, M.J.; van der Ploeg, R.; van Helmond, N.A.G.M.; Waarlo, N.; Agnini, C.; Bijl, P.K.; van der Boon, A.; Brinkhuis, H.; Frieling, J.; Krijgsman, W.; Mather, T.A.; Middelburg, J.J.; Peterse, F.; Slomp, C.P.; Sluijs, A. (2023). Deoxygenation and organic carbon sequestration in the Tethyan realm associated with the middle Eocene climatic optimum. Geol. Soc. Am. Bull. 135(5-6): 1280-1296. https://dx.doi.org/10.1130/b36280.1, meer van der Ploeg, R.; Cramwinckel, M.J.; Kocken, I.J.; Leutert, T.J.; Bohaty, S.M.; Fokkema, C.D.; Hull, P.M.; Meckler, A.N.; Middelburg, J.; Müller, I.A.; Penman, D.E.; Peterse, F; Reichart, G.-J.; Sexton, P.F.; Vahlenkamp, M.; De Vleeschouwer, D.; Wilson, P.A.; Ziegler, M.; Sluijs, A. (2023). North Atlantic surface ocean warming and salinization in response to middle Eocene greenhouse warming. Science Advances 9(4): eabq0110. https://dx.doi.org/10.1126/sciadv.abq0110, meer Epstein, G.; Middelburg, J.J.; Hawkins, J.P.; Norris, C.R.; Roberts, C. M. (2022). The impact of mobile demersal fishing on carbon storage in seabed sediments. Glob. Chang. Biol. 28(9): 2875-2894. https://dx.doi.org/10.1111/gcb.16105, meer Geerken, E.; de Nooijer, L.J.; Toyofuku, T.; Roepert, A.; Middelburg, J.J.; Kienhuis, M.V.M.; Nagai, Y.; Polerecky, L.; Reichart, G.-J. (2022). High precipitation rates characterize biomineralization in the benthic foraminifer Ammonia beccarii. Geochim. Cosmochim. Acta 318: 70-82. https://dx.doi.org/10.1016/j.gca.2021.11.026, meer Geerken, E.; de Nooijer, L.; Toyofuku, T.; Roepert, A.; Middelburg, J.J.; Kienhuis, M.V.M.; Nagai, Y.; Polerecky, L.; Reichart, G.-J. (2022). High precipitation rates characterize biomineralization in the benthic foraminifer Ammonia beccarii. Geochim. Cosmochim. Acta 318: 70-82. https://dx.doi.org/10.1016/j.gca.2021.11.026, meer Hanz, U.; Riekenberg, P.M.; de Kluijver, A.; van der Meer, M.T.J.; Middelburg, J.J.; de Goeij, J.M.; Bart, M.C.; Wurz, E.; Colaço, A.; Duineveld, G.C.A.; Reichart, G.-J.; Rapp, H.T.; Mienis, F. (2022). The important role of sponges in carbon and nitrogen cycling in a deep‐sea biological hotspot. Funct. Ecol. 36(9): 2188-2199. https://dx.doi.org/10.1111/1365-2435.14117, meer Hülse, D.; Vervoort, P.; van de Velde, S.J.; Kanzaki, Y.; Boudreau, B.; Arndt, S.; Bottjer, D.J.; Hoogakker, B.; Kuderer, M.; Middelburg, J.J.; Volkenborn, N.; Turner, S.K.; Ridgwell, A. (2022). Assessing the impact of bioturbation on sedimentary isotopic records through numerical models. Earth-Sci. Rev. 234: 104213. https://dx.doi.org/10.1016/j.earscirev.2022.104213, meer Sulpis, O.; Agrawal, P.; Wolthers, M.; Munhoven, G.; Walker, M.; Middelburg, J. (2022). Aragonite dissolution protects calcite at the seafloor. Nature Comm. 13(1): 1104. https://dx.doi.org/10.1038/s41467-022-28711-z, meer Sulpis, O.; Humphreys, M.P.; Wilhelmus, M.M.; Carroll, D.; Berelson, W.M.; Menemenlis, D.; Middelburg, J.J.; Adkins, J.F. (2022). RADIv1: a non-steady-state early diagenetic model for ocean sediments in Julia and MATLAB/GNU Octave. Geosci. Model Dev. 15(5): 2105-2131. https://dx.doi.org/10.5194/gmd-15-2105-2022, meer Bianchi, T.S.; Aller, R.C.; Atwood, T.B.; Brown, C.J.; Buatois, L.A.; Levin, L.A.; Levinton, J.S.; Middelburg, J.J.; Morrison, E.S.; Regnier, P.; Shields, M.R.; Snelgrove, P.V.R.; Sotka, E.E.; Stanley, R.R.E. (2021). What global biogeochemical consequences will marine animal-sediment interactions have during climate change? Elem. Sci. Anth. 9(1): 25. https://dx.doi.org/10.1525/elementa.2020.00180, meer de Kluijver, A.; Bart, M.C.; van Oevelen, D.; de Goeij, J.M.; Leys, S.P.; Maier, S.R.; Maldonado, M.; Soetaert, K.; Verbiest, S.; Middelburg, J.J. (2021). An integrative model of carbon and nitrogen metabolism in a common deep-sea sponge (Geodia barretti). Front. Mar. Sci. 7: 596251. https://dx.doi.org/10.3389/fmars.2020.596251, meer de Kluijver, A.; Nierop, K.G.J.; Morganti, T.M.; Bart, M.C.; Slaby, B.M.; Hanz, U.; de Goeij, J.M.; Mienis, F.; Middelburg, J.J. (2021). Bacterial precursors and unsaturated long-chain fatty acids are biomarkers of North-Atlantic deep-sea demosponges. PLoS One 16: e0241095. https://doi.org/10.1371/journal.pone.0241095, meer Geerlings, N.M.J.; Geelhoed, J.S.; Vasquez-Cardenas, D.; Kienhuis, M.V.M.; Hidalgo-Martinez, S.; Boschker, H.T.S.; Middelburg, J.J.; Meysman, F.J.R.; Polerecky, L. (2021). Cell cycle, filament growth and synchronized cell division in multicellular cable bacteria. Front. Microbiol. 12: 620807. https://dx.doi.org/10.3389/fmicb.2021.620807, meer Jacques, C.; Gkritzalis, T.; Tison, J.-L.; Hartley, T.; van der Veen, C.; Röckmann, T.; Middelburg, J.J.; Cattrijsse, A.; Egger, M.; Dehairs, F.; Sapart, C.J. (2021). Carbon and hydrogen isotope signatures of dissolved methane in the Scheldt Estuary. Est. Coast. 44(1): 137–146. https://dx.doi.org/10.1007/s12237-020-00768-3, meer Riekenberg, P.M.; Camalich, J.; Svensson, E.; IJsseldijk, L.L.; Brasseur, S.M.; Witbaard, R.; Leopold, M.F.; Rebolledo, E.B.; Middelburg, J.J.; Van der Meer, M.T.J.; Sinninghe Damsté, J.S.; Schouten, S. (2021). Reconstructing the diet, trophic level and migration pattern of mysticete whales based on baleen isotopic composition. Royal Society Open Science 8(12): 210949. https://dx.doi.org/10.1098/rsos.210949, meer Sulpis, O.; Jeansson, E.; Dinauer, A.; Lauvset, S.K.; Middelburg, J.J. (2021). Calcium carbonate dissolution patterns in the ocean. Nature Geoscience 14(6): 423-428. https://dx.doi.org/10.1038/s41561-021-00743-y, meer Geerlings, N.M.J.; Karman, C.; Trashin, S.; As, K.S.; Kienhuis, M.V.M.; Hidalgo-Martinez, S.; Vasquez-Cardenas, D.; Boschker, H.T.S.; De Wael, K.; Middelburg, J.J.; Polerecky, L.; Meysman, F.J.R. (2020). Division of labor and growth during electrical cooperation in multicellular cable bacteria. Proc. Natl. Acad. Sci. U.S.A. 117(10): 5478-5485. https://dx.doi.org/10.1073/pnas.1916244117, meer Grothe, A.; Andreetto; Reichart, G.-J.; Wolthers, M.; Van Baak; Vasiliev, I.; Stoica, M.; Sangiorgi, F.; Middelburg, J.J.; Davies, G.R.; Krijgsman, W. (2020). Paratethys pacing of the Messinian Salinity Crisis: Low salinity waters contributing to gypsum precipitation? Earth Planet. Sci. Lett. 532: 116029. https://dx.doi.org/10.1016/j.epsl.2019.116029, meer Middelburg, J.J.; Soetaert, K.; Hagens, M. (2020). Ocean alkalinity, buffering and biogeochemical processes. Rev. Geophys. 58(3): e2019RG000681. https://doi.org/10.1029/2019rg000681, meer Roepert, A.; Polerecky, L.; Geerken, E.; Reichart, G.-J.; Middelburg, J. (2020). Distribution of chlorine and fluorine in benthic foraminifera. Biogeosciences 17(18): 4727-4743. https://doi.org/10.5194/bg-17-4727-2020, meer Tan, E.; Zou, W.; Zheng, Z.; Yan, X.; Du, M.; Hsu, T.-C.; Tian, L.; Middelburg, J.J.; Trull, W; Kao, S.-J. (2020). Warming stimulates sediment denitrification at the expense of anaerobic ammonium oxidation. Nat. Clim. Chang. 10(4): 349-355. https://dx.doi.org/10.1038/s41558-020-0723-2, meer Cramwinckel, M.J.; van der Ploeg, R.; Bijl, P.K.; Peterse, F; Bohaty, S.M.; Röhl, U.; Schouten, S.; Middelburg, J.J.; Sluijs, A. (2019). Harmful algae and export production collapse in the equatorial Atlantic during the zenith of Middle Eocene Climatic Optimum warmth. Geology (Boulder Colo.) 47(3): 247-250. https://doi.org/10.1130/G45614.1 , meer Geerlings, N.M.J.; Zetsche, E.M.; Hidalgo-Martinez, S.; Middelburg, J.J.; Meysman, F.J.R. (2019). Mineral formation induced by cable bacteria performing long-distance electron transport in marine sediments. Biogeosciences 16(3): 811-829. https://hdl.handle.net/10.5194/bg-16-811-2019, meer González-Benítez, N.; García-Corral, L.S.; Morán, X.A.G.; Middelburg, J.J.; Pizay, M.-D.; Gattuso, J.P. (2019). Drivers of microbial carbon fluxes variability in two oligotrophic Mediterranean coastal systems. NPG Scientific Reports 9: 17669. https://dx.doi.org/10.1038/s41598-019-53650-z, meer Lengger, S.K.; Rush, D.; Mayser, J.P.; Blewett, J.; Schwartz-Narbonne, R.; Talbot, H.M.; Middelburg, J.J.; Jetten, M.S.M.; Schouten, S.; Sinninghe Damsté, J.S. (2019). Dark carbon fixation in the Arabian Sea oxygen minimum zone contributes to sedimentary organic carbon (SOM). Global Biogeochem. Cycles 33(12): 1715-1732. https://dx.doi.org/10.1029/2019gb006282, meer Weiss, G.M.; Roepert, A.; Middelburg, J.J.; Schouten, S.; Sinninghe Damsté, J.S; van der Meer, M.T.J. (2019). Hydrogen isotope fractionation response to salinity and alkalinity in a calcifying strain of Emiliania huxleyi. Org. Geochem. 134: 62-65. https://dx.doi.org/10.1016/j.orggeochem.2019.06.001, meer Boudreau, B.P.; Middelburg, J.J.; Luo, Y. (2018). The role of calcification in carbonate compensation. Nature Geoscience 11(12): 894-900. https://dx.doi.org/10.1038/s41561-018-0259-5, meer Frieling, J.; Reichart, G.-J.; Middelburg, J.J.; Röhl, U.; Westerhold, T.; Bohaty, S.M.; Sluijs, A. (2018). Tropical Atlantic climate and ecosystem regime shifts during the Paleocene–Eocene Thermal Maximum. Clim. Past 14(1): 39-55. https://dx.doi.org/10.5194/cp-14-39-2018, meer Gattuso, J.P.; Magnan, A.K.; Bopp, L.; Cheung, W.W.L.; Duarte, C.M.; Hinkel, J.; McLeod, E.; Micheli, F.; Oschlies, A.; Williamson, P.; Billé, R.; Chalastani, V.I.; Gates, R.; Irisson, J.O.; Middelburg, J.; Pörtner, H.-O.; Rau, G.H. (2018). Ocean solutions to address climate change and its effects on marine ecosystems. Front. Mar. Sci. 5(337): 1-18. https://dx.doi.org/10.3389/fmars.2018.00337, meer Lessin, G.; Artioli, Y.; Almroth-Rosell, E.; Blackford, J.C.; Dale, A. W.; Glud, R.N.; Middelburg, J.J.; Pastres, R.; Queirós, A.M.; Rabouille, C.; Regnier, P.; Soetaert, K.; Solidoro, C.; Stephens, N.; Yakushev, E. (2018). Modelling marine sediment biogeochemistry: current knowledge gaps, challenges, and some methodological advice for advancement. Front. Mar. Sci. 5: 19. https://doi.org/10.3389/fmars.2018.00019, meer Sulu-Gambari, F; Hagens, M.; Behrends, T; Seitaj, D.; Meysman, F.J.R.; Middelburg, J.; Slomp, C.P. (2018). Phosphorus cycling and burial in sediments of a seasonally hypoxic marine basin. Est. Coast. 41(4): 921–939. https://dx.doi.org/10.1007/s12237-017-0324-0, meer van Bree, L.G.J.; Peterse, F.; van der Meer, M.T.J.; Middelburg, J.J.; Negash, A.M.D.; De Crop, W.; Cocquyt, C.; Wieringa, J.J.; Verschuren, D.; Sinninghe Damsté, J.S. (2018). Seasonal variability in the abundance and stable carbon-isotopic composition of lipid biomarkers in suspended particulate matter from a stratified equatorial lake (Lake Chala, Kenya/Tanzania): Implications for the sedimentary record. Quat. Sci. Rev. 192: 208-224. https://doi.org/10.1016/j.quascirev.2018.05.023, meer Van Oevelen, D.; Mueller, C.E.; Lundälv, T.; van Duyl, F.C.; de Goeij, J.M.; Middelburg, J.J. (2018). Niche overlap between a cold-water coral and an associated sponge for isotopically-enriched particulate food sources. PLoS One 13(3): e0194659. https://dx.doi.org/10.1371/journal.pone.0194659, meer Christianen, M.J.A.; Middelburg, J.J.; Holthuijsen, S.J.; Jouta, J.; Compton, T.J.; van der Heide, T.; Piersma, T.; Sinninghe Damsté, J.S.; van der Veer, H.W.; Schouten, S.; Olff, H. (2017). Benthic primary producers are key to sustain the Wadden Sea food web: stable carbon isotope analysis at landscape scale. Ecology 98(6): 1498-1512. https://dx.doi.org/10.1002/ecy.1837, meer Frieling, J.; Gebhardt, H.; Huber, M.; Adekeye, O.A.; Akande, S.O.; Reichart, G.-J.; Middelburg, J.J.; Schouten, S.; Sluijs, A. (2017). Extreme warmth and heat-stressed plankton in the tropics during the Paleocene-Eocene Thermal Maximum. Science Advances 3(3): e1600891. https://dx.doi.org/10.1126/sciadv.1600891, meer Holding, J.M.; Duarte, C.M.; Delgado-Huertas, A.; Soetaert, K.; Vonk, J.E.; Agusti, S.; Wassmann, P.; Middelburg, J. (2017). Autochthonous and allochthonous contributions of organic carbon to microbial food webs in Svalbard fjords. Limnol. Oceanogr. 62(3): 1307-1323. https://dx.doi.org/10.1002/lno.10526, meer Lammers, J.M.; Schubert, C.J.; Middelburg, J.J.; Reichart, G.J. (2017). Microbial carbon processing in oligotrophic Lake Lucerne (Switzerland): results of in situ ¹³C-labelling studies. Biogeochemistry 136(2): 131-149. https://dx.doi.org/10.1007/s10533-017-0389-7, meer Le Guitton, M.; Soetaert, K.; Sinninghe Damsté, J.S.; Middelburg, J.J. (2017). A seasonal study of particulate organic matter composition and quality along an offshore transect in the southern North Sea. Est., Coast. and Shelf Sci. 188: 1-11. https://dx.doi.org/10.1016/j.ecss.2017.02.002, meer Maugendre, L.; Gattuso, J.-P.; de Kluijver, A.; Soetaert, K.; van Oevelen, D.; Middelburg, J.J.; Gazeau, F. (2017). Carbon-13 labelling shows no effect of ocean acidification on carbon transfer in Mediterranean plankton communities. Est., Coast. and Shelf Sci. 186(Part A): 100-111. dx.doi.org/10.1016/j.ecss.2015.12.018, meer Morales, C.; Rogov, M.; Wierzbowski, H.; Ershova, V.; Suan, G; Adatte, T.; Föllmi, K.B.; Tegelaar, E.; Reichart, G.-J.; de Lange, G.J.; Middelburg, J.J.; van de Schootbrugge, B. (2017). Glendonites track methane seepage in Mesozoic polar seas. Geology (Boulder Colo.) 45(6): 503-506. https://doi.org/10.1130/G38967.1, meer Brouwer, G.M.; Duijnstee, I.A.P.; Hazeleger, J.H.; Rossi, F.; Lourens, L.J.; Middelburg, J.J; Wolthers, M. (2016). Diet shifts and population dynamics of estuarine foraminifera during ecosystem recovery after experimentally induced hypoxia crises. Est., Coast. and Shelf Sci. 170: 20-33. dx.doi.org/10.1016/j.ecss.2015.12.015, meer Svensson, E.; Schouten, S.; Hopmans, E.C.; Middelburg, J.J.; Sinninghe Damsté, J.S. (2016). Factors Controlling the Stable Nitrogen Isotopic Composition (δ15N) of Lipids in Marine Animals. PLoS One 11(1): e0146321. https://dx.doi.org/10.1371/journal.pone.0146321, meer Tadonléké, R.D.; Pollet, T.; van Rijswijk, P.; Leberre, B.; Middelburg, J.J. (2016). Effects of oxygen loss on carbon processing and heterotrophic prokaryotes from an estuarine ecosystem: results from stable isotope probing and cytometry analyses. Est. Coast. 39(4): 992-1005. http://dx.doi.org/10.1007/s12237-015-0053-1, meer Van Oevelen, D.; Mueller, C.E.; Lundälv, T.; Middelburg, J.J. (2016). Food selectivity and processing by the cold-water coral Lophelia pertusa. Biogeosciences 13: 5789–5798. https://dx.doi.org/10.5194/bg-13-5789-2016, meer Woulds, C.; Bouillon, S.; Cowie, G.L.; Drake, E.; Middelburg, J.J.; Witte, U. (2016). Patterns of carbon processing at the seafloor: the role of faunal and microbial communities in moderating carbon flows. Biogeosciences 13(15): 4343-4357. https://dx.doi.org/10.5194/bg-13-4343-2016, meer Braeckman, U.; Provoost, P.; Sabbe, K.; Soetaert, K.; Middelburg, J.J.; Vincx, M.; Vanaverbeke, J. (2015). Temporal dynamics in a shallow coastal benthic food web: Insights from fatty acid biomarkers and their stable isotopes. Mar. Environ. Res. 108: 55-68. http://dx.doi.org/10.1016/j.marenvres.2015.04.010, meer Brouwer, M.G.M.; Wolthers, M.; Hazeleger, J.H.; Rossi, F; Lourens, L.J.; Middelburg, J.J.; Duijnstee, I.A.P. (2015). Differential response of intertidal Foraminifera to community recovery following experimentally induced hypoxia. Journal of Foraminiferal Research 45(3): 220-234. http://dx.doi.org/10.2113/gsjfr.45.3.220, meer de Kluijver, A.; Ning, J.; Liu, Z.; Jeppesen, E.; Gulati, R.D.; Middelburg, J.J. (2015). Macrophytes and periphyton carbon subsidies to bacterioplankton and zooplankton in a shallow eutrophic lake in tropical China. Limnol. Oceanogr. 60: 375-385. dx.doi.org/10.1002/lno.10040, meer Hagens, M.; Slomp, C.P.; Meysman, F.J.R.; Seitaj, D.; Harlay, J.; Borges, A.V.; Middelburg, J.J. (2015). Biogeochemical processes and buffering capacity concurrently affect acidification in a seasonally hypoxic coastal marine basin. Biogeosciences 12(5): 1561-1583. dx.doi.org/10.5194/bg-12-1561-2015, meer Kim, J.H.; Schouten, S.; Rodrigo-Gámiz, M.; Rampen, S.W.; Marino, G.; Huguet, C.; Helmke, P.; Buscail, R.; Hopmans, E.C.; Pross, J.; Sangiorgi, F.; Middelburg, J.; Sinninghe Damsté, J.S. (2015). Influence of deep-water derived isoprenoid tetraether lipids on the TEX ^h ₈₆ paleothermometer in the Mediterranean Sea. Geochim. Cosmochim. Acta 150: 125–141. dx.doi.org/10.1016/j.gca.2014.11.017, meer Le Guitton, M.; Soetaert, K.; Sinninghe Damsté, J.S.; Middelburg, J.J. (2015). Biogeochemical consequences of vertical and lateral transport of particulate organic matter in the southern North Sea: A multiproxy approach. Est., Coast. and Shelf Sci. 165: 117-127. https://dx.doi.org/10.1016/j.ecss.2015.09.010, meer Middelburg, J.J. (2015). Escape by dilution. Science (Wash.) 348(6232): 290. http://dx.doi.org/10.1126/science.aaa9852, meer Middelburg, J.J.; Mueller, C.E.; Veuger, B.; Larsson, A.I.; Form, A.; van Oevelen, D. (2015). Discovery of symbiotic nitrogen fixation and chemoautotrophy in cold-water corals. NPG Scientific Reports 5(17962): 9 pp. http://dx.doi.org/10.1038/srep17962, meer Svensson, E.; Schouten, S.; Stam, A.; Middelburg, J.J.; Sinninghe Damsté, J.S. (2015). Compound-specific stable isotope analysis of nitrogen-containing intact polar lipids. Rapid Comm. Mass Spectrom. 29(23): 2263–2271. dx.doi.org/10.1002/rcm.7393, meer Vasquez-Cardenas, D.; van de Vossenberg, J.; Polerecky, L.; Malkin, S.Y.; Schauer, R.; Hidalgo-Martinez, S.; Confurius-Guns, V.; Middelburg, J.J.; Meysman, F.J.R.; Boschker, H.T.S. (2015). Microbial carbon metabolism associated with electrogenic sulphur oxidation in coastal sediments. ISME J. 9(9): 1966-1978. dx.doi.org/10.1038/ismej.2015.10, meer de Kluijver, A.; Schoon, P.L.; Downing, J.A.; Schouten, S.; Middelburg, J.J. (2014). Stable carbon isotope biogeochemistry of lakes along a trophic gradient. Biogeosciences 11: 6265– 6276. dx.doi.org/10.5194/bg-11-6265-2014, meer Gazeau, F.; van Rijswijk, P.; Pozzato, L.; Middelburg, J.J. (2014). Impacts of Ocean Acidification on Sediment Processes in Shallow Waters of the Arctic Ocean. PLoS One 9(4): e94068. dx.doi.org/10.1371/journal.pone.0094068, meer Moneta, A.; Veuger, B.; van Rijswijk, P.; Meysman, F; Soetaert, K.; Middelburg, J.J. (2014). Dissolved inorganic and organic nitrogen uptake in the coastal North Sea: a seasonal study. Est., Coast. and Shelf Sci. 147: 78-86. http://dx.doi.org/10.1016/j.ecss.2014.05.022, meer Mueller, C.E.; Larsson, A.I.; Veuger, B.; Middelburg, J.J.; van Oevelen, D. (2014). Opportunistic feeding on various organic food sources by the cold-water coral Lophelia pertusa. Biogeosciences 11(1): 123-133. dx.doi.org/10.5194/bg-11-123-2014, meer Svensson, E.; Freitas, V.; Schouten, S.; Middelburg, J.J.; van der Veer, H.W.; Sinninghe Damsté, J.S. (2014). Comparison of the stable carbon and nitrogen isotopic values of gill and white muscle tissue of fish. J. Exp. Mar. Biol. Ecol. 457: 173-179. dx.doi.org/10.1016/j.jembe.2014.04.014, meer Woulds, C.; Middelburg, J.J.; Cowie, G.L. (2014). Alteration of organic matter during infaunal polychaete gut passage and links to sediment organic geochemistry. Part II: Fatty acids and aldoses. Geochim. Cosmochim. Acta 136: 38-59. dx.doi.org/10.1016/j.gca.2014.02.013, meer Adams Krumins, J.; van Oevelen, D.; Bezemer, T.M.; de Deyn, G.B.; Hol, W.H.G.; van Donk, E.; de Boer, W.; de Ruiter, P.C.; Middelburg, J.J.; Monroy, F.; Soetaert, K.; Thébault, E.; van de Koppel, J.; van Veen, J.A.; Viketoft, M.; van der Putten, W.H. (2013). Soil and Freshwater and Marine Sediment Food Webs: Their Structure and Function. BioScience 63(1): 35-42. dx.doi.org/10.1525/bio.2013.63.1.8, meer de Goeij, J.M.; van Oevelen, D.; Vermeij, M.J.A.; Osinga , R.; Middelburg, J.J.; de Goeij, A.F.P.M.; Admiraal, W. (2013). Surviving in a marine desert: The sponge loop retains resources within coral reefs. Science (Wash.) 342(6154): 108-110. http://dx.doi.org/10.1126/science.1241981, meer de Kluijver, A.; Soetaert, K.; Czerny, J.; Schulz, K.G.; Boxhammer, T.; Riebesell, U.; Middelburg, J.J. (2013). A ¹³C labelling study on carbon fluxes in Arctic plankton communities under elevated CO₂ levels. Biogeosciences 10(3): 1425-1440. dx.doi.org/10.5194/bg-10-1425-2013, meer Koho, K.A.; Nierop, K.G.J.; Moodley, L.; Middelburg, J.J.; Pozzato, L.; Soetaert, K.; van der Plicht, J.; Reichart, G.J. (2013). Microbial bioavailability regulates organic matter preservation in marine sediments. Biogeosciences 10(2): 1131-1141. dx.doi.org/10.5194/bg-10-1131-2013, meer Kürten, B.; Painting, S.J.; Struck , U.; Polunin, N.V.C.; Middelburg, J.J. (2013). Tracking seasonal changes in North Sea zooplankton trophic dynamics using stable isotopes. Biogeochemistry 113(1-3): 167-187. dx.doi.org/10.1007/s10533-011-9630-y, meer Kürten, B.; Frutos, I.; Struck, U.; Painting, S.J.; Polunin, N.V.C.; Middelburg, J.J. (2013). Trophodynamics and functional feeding groups of North Sea fauna: a combined stable isotope and fatty acid approach. Biogeochemistry 113(1-3): 189-212. dx.doi.org/10.1007/s10533-012-9701-8, meer Morris, E.P.; Peralta, G.; Van Engeland, T.; Bouma, T.J.; Brun, F.G.; Lara, M.; Hendriks, I.E.; Benavente, J.; Soetaert, K.; Middelburg, J.J.; Perez-Llorens, J.L. (2013). The role of hydrodynamics in structuring in situ ammonium uptake within a submerged macrophyte community. Limnol. Oceanogr. 3: 210-224. http://dx.doi.org/10.1215/21573689-2397024, meer Mueller, C.E.; Lundälv, T.; Middelburg, J.J.; van Oevelen, D. (2013). The Symbiosis between Lophelia pertusa and Eunice norvegica Stimulates Coral Calcification and Worm Assimilation. PLoS One 8(3). dx.doi.org/10.1371/journal.pone.0058660, meer Pozzato, L.; van Oevelen, D.; Moodley, L.; Soetaert, K.; Middelburg, J.J. (2013). Carbon processing at the deep-sea floor of the Arabian Sea oxygen minimum zone: A tracer approach. J. Sea Res. 78: 45-58. dx.doi.org/10.1016/j.seares.2013.01.002, meer Pozzato, L.; van Oevelen, D.; Moodley, L.; Soetaert, K.; Middelburg, J.J (2013). Sink or link? The bacterial role in benthic carbon cycling in the Arabian Sea's oxygen minimum zone. Biogeosciences 10: 6879-6891. http://dx.doi.org/10.5194/bg-10-6879-2013, meer Provoost, P.; Braeckman, U.; Van Gansbeke, D.; Moodley, L.; Soetaert, K.; Middelburg, J.J.; Vanaverbeke, J. (2013). Modelling benthic oxygen consumption and benthic-pelagic coupling at a shallow station in the southern North Sea. Est., Coast. and Shelf Sci. 120: 1-11. http://dx.doi.org/10.1016/j.ecss.2013.01.008, meer Rossi, F.; Gribsholt, B.; Gazeau, F.; Di Santo, V.; Middelburg, J.J. (2013). Complex Effects of Ecosystem Engineer Loss on Benthic Ecosystem Response to Detrital Macroalgae. PLoS One 8(6), meer Schoon, P.L.; de Kluijver, A.; Middelburg, J.J.; Downing, J.A.; Sinninghe Damsté, J.S.; Schouten, S. (2013). Influence of lake water pH and alkalinity on the distribution of coreand intact polar branched glycerol dialkyl glycerol tetraethers (GDGTs) in lakes. Org. Geochem. 60: 72-82. dx.doi.org/10.1016/j.orggeochem.2013.04.015, meer van Duinen, G.A.; Vermonden, K.; Bodelier, P.L.E.; Hendriks, A.J.; Leuven, R.S.E.W.; Middelburg, J.J.; van der Velde, G.; Verberk, W.C.E.P. (2013). Methane as a carbon source for the food web in raised bog pools. Freshwater Science 32(4): 1260–1272. https://dx.doi.org/10.1899/12-121.1, meer Van Engeland, T.; Bouma, T.J.; Morris, E.P.; Brun, F.G.; Peralta, G.; Lara, M.; Hendriks, I.E.; van Rijswijk, P.; Veuger, B.; Soetaert, K.; Middelburg, J.J. (2013). Dissolved organic matter uptake in a temperate seagrass ecosystem. Mar. Ecol. Prog. Ser. 478: 87-100. dx.doi.org/10.3354/meps10183, meer Veuger, B.; Pitcher, A.; Schouten, S.; Sinninghe Damsté, J.S.; Middelburg, J.J. (2013). Nitrification and growth of autotrophic nitrifying bacteria and Thaumarchaeota in the coastal North Sea. Biogeosciences 10(3): 1775-1785. dx.doi.org/10.5194/bg-10-1775-2013, meer Braeckman, U.; Provoost, P.; Sabbe, K.; Soetaert, K.; Middelburg, J.J.; Vincx, M.; Vanaverbeke, J. (2012). Temporal dynamics in the diet of two marine polychaetes as inferred from fatty acid biomarkers. J. Sea Res. 68: 6-19. dx.doi.org/10.1016/j.seares.2011.11.003, meer Dähnke, K.; Moneta, A.; Veuger, B.; Soetaert, K.; Middelburg, J.J. (2012). Balance of assimilative and dissimilative nitrogen processes in a diatom-rich tidal flat sediment. Biogeosciences 9(10): 4059-4070. http://dx.doi.org/10.5194/bg-9-4059-2012, meer de Kluijver, A.; Yu, J.L.; Houtekamer, M.; Middelburg, J.J.; Liu, Z.W. (2012). Cyanobacteria as a carbon source for zooplankton in eutrophic Lake Taihu, China, measured by ₁₃C labeling and fatty acid biomarkers. Limnol. Oceanogr. 57(4): 1245-1254. dx.doi.org/10.4319/lo.2012.57.4.1245, meer Downing, J.A.; Cole, J.J.; Duarte, C.M.; Middelburg, J.J.; Melack, J.M.; Prairie, Y.T.; Kortelainen, P.; Striegl, R.G.; McDowell, W.H.; Tranvik, L.J. (2012). Global abundance and size distribution of streams and rivers. Inland Waters 2(4): 229-236. dx.doi.org/10.5268/IW-2.4.502, meer Evrard, V.; Huettel, M.; Cook, P.L.M.; Soetaert, K.; Heip, C.H.R.; Middelburg, J.J. (2012). Importance of phytodetritus and microphytobenthos for heterotrophs in a shallow subtidal sandy sediment. Mar. Ecol. Prog. Ser. 455: 13-31. dx.doi.org/10.3354/meps09676, meer Oakes, J.M.; Eyre, B.D.; Middelburg, J.J. (2012). Transformation and fate of microphytobenthos carbon in subtropical shallow subtidal sands: A ¹³C-labeling study. Limnol. Oceanogr. 57(6): 1846-1856. dx.doi.org/10.4319/lo.2012.57.6.1846, meer Pedrotti, M.L.; Fiorini, S.; Kerros, M.E.; Middelburg, J.J.; Gattuso, J.P. (2012). Variable production of transparent exopolymeric particles by haploid and diploid life stages of coccolithophores grown under different CO₂ concentrations. J. Plankton Res. 34(5): 388-398. dx.doi.org/10.1093/plankt/fbs012, meer Van Colen, C.; Rossi, F.; Montserrat, F.; Andersson, M.G.I.; Gribsholt, B.; Herman, P.M.J.; Degraer, S.; Vincx, M.; Ysebaert, T.; Middelburg, J.J,. (2012). Organism-sediment interactions govern post-hypoxia recovery of ecosystem functioning. PLoS One 7(11): e49795. http://dx.doi.org/10.1371/journal.pone.0049795, meer Veuger, B.; van Oevelen, D.; Middelburg, J.J. (2012). Fate of microbial nitrogen, carbon, hydrolysable amino acids, monosaccharides, and fatty acids in sediment. Geochim. Cosmochim. Acta 83: 217-233. https://dx.doi.org/10.1016/j.gca.2011.12.016, meer Woulds, C.; Middelburg, J.J.; Cowie, G.L. (2012). Alteration of organic matter during infaunal polychaete gut passage and links to sediment organic geochemistry. Part I: Amino acids. Geochim. Cosmochim. Acta 77: 396-414. dx.doi.org/10.1016/j.gca.2011.10.042, meer Braeckman, U.; Provoost, P.; Moens, T.; Soetaert, K.; Middelburg, J.J.; Vincx, M.; Vanaverbeke, J. (2011). Biological vs. physical mixing effects on benthic food web dynamics. PLoS One 6(3): e18078. dx.doi.org/10.1371/journal.pone.0018078, meer Gazeau, F.; Gattuso, J.P.; Greaves, M.; Elderfield, H.; Peene, J.; Heip, C.H.R.; Middelburg, J.J. (2011). Effect of Carbonate Chemistry Alteration on the Early Embryonic Development of the Pacific Oyster (Crassostrea gigas). PLoS One 6(8): e23010; 1-8. dx.doi.org/10.1371/journal.pone.0023010, meer Moodley, L.; Nigam, R.; Ingole, B.; Babu, C.P.; Panchang, R.; Nanajkar, M.; Sivadas, S.; van Breugel, P.; van Ijzerloo, L.; Rutgers, R.; Heip, C.H.R.; Middelburg, J.J. (2011). Oxygen minimum seafloor ecological (mal) functioning. J. Exp. Mar. Biol. Ecol. 398(1-2): 91-100. dx.doi.org/10.1016/j.jembe.2010.12.015, meer van Duyl, F.C.; Moodley, L.; Nieuwland, G.; van Ijzerloo, L.; van Soest, R.W.M.; Houtekamer, M.; Meesters, E.H.; Middelburg, J.J. (2011). Coral cavity sponges depend on reef-derived food resources: stable isotope and fatty acid constraints. Mar. Biol. (Berl.) 158(7): 1653-1666. dx.doi.org/10.1007/s00227-011-1681-z, meer Van Engeland, T.; Bouma, T.J.; Morris, E.P.; Brun, F.G.; Peralta, G.; Lara, M.; Hendriks, I.E.; Soetaert, K.; Middelburg, J.J.; Middelburg, J.J. (2011). Potential uptake of dissolved organic matter by seagrasses and macroalgae. Mar. Ecol. Prog. Ser. 427: 71-81. https://dx.doi.org/10.3354/meps09054, meer Braeckman, U.; Provoost, P.; Gribsholt, B.; Van Gansbeke, D.; Middelburg, J.; Soetaert, K.; Vincx, M.; Vanaverbeke, J. (2010). Role of macrofauna functional traits and density in biogeochemical fluxes and bioturbation. Mar. Ecol. Prog. Ser. 399: 173-186. https://dx.doi.org/10.3354/meps08336, meer De Laender, F.; Soetaert, K.; De Schamphelaere, K.A.C.; Middelburg, J.J.; Janssen, C.R. (2010). Ecological significance of hazardous concentrations in a planktonic food web. Ecotoxicol. Environ. Saf. 73(3): 247-253. http://dx.doi.org/10.1016/j.ecoenv.2009.12.008, meer De Laender, F.; van Oevelen, D.; Frantzen, S.; Middelburg, J.J.; Soetaert, K. (2010). Seasonal PCB bioaccumulation in an Arctic marine ecosystem: a model analysis incorporating lipid dynamics, food-web productivity and migration. Environ. Sci. Technol. 44(1): 356-361. https://dx.doi.org/10.1021/es902625u, meer Gazeau, F.; Gattuso, J.P.; Dawber, C.; Pronker, A.E.; Peene, F.; Peene, J.; Heip, C.H.R.; Middelburg, J.J. (2010). Effect of ocean acidification on the early life stages of the blue mussel (Mytilus edulis). Biogeosciences 7(7): 2051-2060. http://dx.doi.org/10.5194/bg-7-2051-2010, meer Provoost, P.; van Heuven, S.; Soetaert, K.; Laane, R.W.P.M.; Middelburg, J.J. (2010). Seasonal and long-term changes in pH in the Dutch coastal zone. Biogeosciences 7(11): 3869-3878. http://dx.doi.org/10.5194/bg-7-3869-2010, meer Van Frausum, J.; Middelburg, J.J.; Soetaert, K.; Meysman, F.J.R. (2010). Different proxies for the reactivity of aquatic sediments towards oxygen: a model assessment. Ecol. Model. 221(17): 2054-2067. https://dx.doi.org/10.1016/j.ecolmodel.2010.06.001, meer Zhang, J.; Gilbert, D.; Gooday, A.; Levin, L.; Naqvi, S.W.A.; Middelburg, J.J; Scranton, M.; Ekau, W.; Peña, A.; Dewitte, B.; Oguz, T.; Monteiro, P.M.S.; Urban, E.; Rabalais, N.N.; Ittekkot, V.; Kemp, W.M.; Ulloa, O.; Elmgren, R.; Escobar-Briones, E.; van der Plas, A.K. (2010). Natural and human-induced hypoxia and consequences for coastal areas: synthesis and future development. Biogeosciences 7(5): 1443-1467. https://dx.doi.org/10.5194/bg-7-1443-2010, meer Zonneveld, K.A.F.; Versteegh, G.J.M.; Kasten, S.; Eglinton, T.I.; Emeis, K.-C.; Huguet, C.; Koch, B.P.; de Lange, G.J.; de Leeuw, J.W.; Middelburg, J.J.; Mollenhauer, G.; Prahl, F.G.; Rethemeyer, J.; Wakeham, S.G. (2010). Selective preservation of organic matter in marine environments; processes and impact on the sedimentary record. Biogeosciences 7(2): 483-511. https://dx.doi.org/10.5194/bg-7-483-2010, meer Bouillon, S.; Abril, G.; Borges, A.V.; Dehairs, F.; Govers, G.; Hughes, H.J.; Merckx, R.; Meysman, F.J.R.; Nyunja, J.; Osburn, C.; Middelburg, J.J. (2009). Distribution, origin and cycling of carbon in the Tana River (Kenya): a dry season basin-scale survey from headwaters to the delta. Biogeosciences 6(11): 2475-2493. http://dx.doi.org/10.5194/bg-6-2475-2009, meer Cook, P.L.M.; van Oevelen, D.; Soetaert, K.; Middelburg, J.J. (2009). Carbon and nitrogen cycling on intertidal mudflats of a temperate Australian estuary: 4. Inverse model analysis and synthesis. Mar. Ecol. Prog. Ser. 394: 35-48. http://dx.doi.org/10.3354/meps08270, meer Cox, T.J.S.; Maris, T.; Soetaert, K.; Conley, D.J.; Van Damme, S.; Meire, P.; Middelburg, J.J.; Vos, M.; Struyf, E. (2009). A macro-tidal freshwater ecosystem recovering from hypereutrophication: the Schelde case study. Biogeosciences 6(12): 2935-2948, meer Dijkman, N.A.; Boschker, H.T.S.; Middelburg, J.J.; Kromkamp, J.C. (2009). Group-specific primary production based on stable-isotope labeling of phospholipid-derived fatty acids. Limnol. Oceanogr., Methods 7: 612-625. dx.doi.org/10.4319/lom.2009.7.612, meer Gribsholt, B.; Veuger, B.; Tramper, A.; Middelburg, J.J.; Boschker, H.T.S. (2009). Long-term ¹⁵N-nitrogen retention in tidal freshwater marsh sediment: elucidating the microbial contribution. Limnol. Oceanogr. 54(1): 13-22. https://dx.doi.org/10.4319/lo.2009.54.1.0013, meer Hofmann, A.F.; Middelburg, J.J.; Soetaert, K.; Meysman, F.J.R. (2009). pH modelling in aquatic systems with time-variable acid-base dissociation constants applied to the turbid, tidal Scheldt estuary. Biogeosciences 6(8): 1539-1561. http://dx.doi.org/10.5194/bg-6-1539-2009, meer Soetaert, K.; Middelburg, J.J. (2009). Modeling eutrophication and oligotrophication of shallow-water marine systems: the importance of sediments under stratified and well-mixed conditions. Hydrobiologia 629(1): 239-254. http://dx.doi.org/10.1007/s10750-009-9777-x, meer Van den Meersche, K.; Van Rijswijk, P.; Soetaert, K.; Middelburg, J.J. (2009). Autochthonous and allochthonous contributions to mesozooplankton diet in a tidal river and estuary: integrating carbon isotope and fatty acid constraints. Limnol. Oceanogr. 54(1): 62-74. https://dx.doi.org/10.4319/lo.2009.54.1.0062, meer Van Gaever, S.; Moodley, L.; Pasotti, F.; Houtekamer, M.; Middelburg, J.J.; Danovaro, R.; Vanreusel, A. (2009). Trophic specialisation of metazoan meiofauna at the Håkon Mosby Mud Volcano: fatty acid biomarker isotope evidence. Mar. Biol. (Berl.) 156(6): 1289-1296. dx.doi.org/10.1007/s00227-009-1170-9, meer Van Nugteren, P.; Herman, P.M. J.; Moodley, L.; Middelburg, J.J.; Vos, M.; Heip, C.H.R. (2009). Spatial distribution of detrital resources determines the outcome of competition between bacteria and a facultative detritivorous worm. Limnol. Oceanogr. 54(5): 1413-1419. https://dx.doi.org/10.4319/lo.2009.54.5.1413, meer Van Nugteren, P.; Moodley, L.; Brummer, G.-J.; Heip, C.H.R.; Herman, P.M. J.; Middelburg, J.J. (2009). Seafloor ecosystem functioning: the importance of organic matter priming. Mar. Biol. (Berl.) 156(11): 2277-2287. https://dx.doi.org/10.1007/s00227-009-1255-5, meer Andersson, J.H.; Woulds, C.; Schwartz, M.; Cowie, G.L.; Levin, L.A.; Soetaert, K.; Middelburg, J.J. (2008). Short-term fate of phytodetritus in sediments across the Arabian Sea Oxygen Minimum Zone. Biogeosciences 5(1): 43-53, meer Bouillon, S.; Borges, A.V.; Castañeda-Moya, E.; Diele, K.; Dittmar, T.; Duke, N.C.; Kristensen, E.; Lee, S.Y.; Marchand, C.; Middelburg, J.J.; Rivera-Monroy, V.H.; Smith III, T.J.; Twilley, R.R. (2008). Mangrove production and carbon sinks: A revision of global budget estimates. Global Biogeochem. Cycles 22(2): GB2013. https://dx.doi.org/10.1029/2007GB003052, meer Duce, R.A.; LaRoche, J.; Altieri, K.; Arrigo, K.R.; Baker, A.R.; Capone, D.G.; Cornell, S.; Dentener, F.; Galloway, J.N.; Ganeshram, R.S.; Geider, R.J.; Jickells, T.; Kuypers, M.M.; Langlois, R.; Liss, P.S.; Liu, S.M.; Middelburg, J.J.; Moore, C.M.; Nickovic, S.; Oschlies, A.; Pedersen, T.; Prospero, J.; Schlitzer, R.; Seitzinger, S.; Sorensen, L.L.; Uematsu, U.; Ulloa, O.; Voss, B.; Ward, B.; Zamora, L. (2008). Impacts of atmospheric anthropogenic nitrogen on the open ocean. Science (Wash.) 320(5878): 893-897, meer Hofmann, A.F.; Meysman, F.J.R.; Soetaert, K.; Middelburg, J.J. (2008). A step-by-step procedure for pH model construction in aquatic systems. Biogeosciences 5(1): 227-251. https://dx.doi.org/10.5194/bg-5-227-2008, meer Hofmann, A.F.; Soetaert, K.; Middelburg, J.J. (2008). Present nitrogen and carbon dynamics in the Scheldt estuary using a novel 1-D model. Biogeosciences 5(4): 981-1006. https://dx.doi.org/10.5194/bg-5-981-2008, meer Moodley, L.; Steyaert, M.; Epping, E.; Middelburg, J.J.; Vincx, M.; van Avesaath, P.; Moens, T.; Soetaert, K. (2008). Biomass-specific respiration rates of benthic meiofauna: Demonstrating a novel oxygen micro-respiration system. J. Exp. Mar. Biol. Ecol. 357(1): 41-47. dx.doi.org/10.1016/j.jembe.2007.12.025, meer Ralison, O.H.; Borges, A.V.; Dehairs, F.; Middelburg, J.J.; Bouillon, S. (2008). Carbon biogeochemistry of the Betsiboka estuary (north-western Madagascar). Org. Geochem. 39(12): 1649-1658. http://dx.doi.org/10.1016/j.orggeochem.2008.01.010, meer Rossi, F.; Gribsholt, B.; Middelburg, J.J.; Heip, C.H.R. (2008). Context-dependent effects of suspension feeding on intertidal ecosystem functioning. Mar. Ecol. Prog. Ser. 354: 47-57. http://dx.doi.org/10.3354/meps07213, meer Van den Meersche, K.; Soetaert, K.; Middelburg, J.J. (2008). A Bayesian Compositional Estimator for microbial taxonomy based on biomarkers. Limnol. Oceanogr., Methods 6(5): 190-199. https://dx.doi.org/10.4319/lom.2008.6.190, meer Bouillon, S.; Middelburg, J.J.; Dehairs, F.A.; Borges, A.V.; Abril, G.; Flindt, M.R.; Ulomi, S.; Kristensen, E. (2007). Importance of intertidal sediment processes and porewater exchange on the water column biogeochemistry in a pristine mangrove creek (Ras Dege, Tanzania). Biogeosciences 4(3): 311-322, meer Gazeau, F.; Quiblier, C.; Jansen, J.M.; Gattuso, J.P.; Middelburg, J.J.; Heip, C.H.R. (2007). Impact of elevated CO₂ on shellfish calcification. Geophys. Res. Lett. 34(7): L07603. https://dx.doi.org/10.1029/2006GL028554, meer Gribsholt, B.; Struyf, E.; Tramper, A.; De Brabandere, L.; Brion, N.; van Damme, S.; Meire, P.; Dehairs, F.; Middelburg, J.J.; Boschker, H.T.S. (2007). Nitrogen assimilation and short term retention in a nutrient-rich tidal freshwater marsh - a whole ecosystem ¹⁵N enrichment study. Biogeosciences 4(1): 11-26. https://dx.doi.org/10.5194/bg-4-11-2007, meer Meysman, F.J.R.; Malyuga, V.S.; Boudreau, B.P.; Middelburg, J.J. (2007). The influence of porosity gradients on mixing coefficients in sediments. Geochim. Cosmochim. Acta 71(4): 961-973, meer Middelburg, J.J.; Meysman, F.J.R. (2007). Burial at sea. Science (Wash.) 316(5829): 1294-1295. dx.doi.org/10.1126/science.1144001, meer Rochelle-Newall, E.J.; Winter, C.; Barrón, C.; Borges, A.V.; Duarte, C.M.; Elliott, M.; Frankignoulle, M.; Gazeau, F.; Middelburg, J.J.; Pizay, M.-D.; Gattuso, J.P. (2007). Artificial neural network analysis of factors controlling ecosystem metabolism in coastal systems. Ecol. Appl. 17(Supplement): S185-S196. http://dx.doi.org/10.1890/05-1769.1, meer Rossi, F.; Forster, R.M.; Montserrat, F.; Ponti, M.; Terlizzi, A.; Ysebaert, T.J.; Middelburg, J.J. (2007). Human trampling as short-term disturbance on intertidal mudflats: effects on macrofauna biodiversity and population dynamics of bivalves. Mar. Biol. (Berl.) 151(6): 2077-2090. dx.doi.org/10.1007/s00227-007-0641-0, meer Soetaert, K.; Hofmann, A.F.; Middelburg, J.J.; Meysman, F.J.R.; Greenwood, J. (2007). The effect of biogeochemical processes on pH. Mar. Chem. 105(1-2): 30-51, meer Struyf, E.; Van Damme, S.; Gribsholt, B.; Bal, K.; Beauchard, O.; Middelburg, J.J.; Meire, P. (2007). Phragmites australis and silica cycling in tidal wetlands. Aquat. Bot. 87(2): 134-140. dx.doi.org/10.1016/j.aquabot.2007.05.002, meer Veuger, B.; Middelburg, J.J. (2007). Incorporation of nitrogen from amino acids and urea by benthic microbes: role of bacteria versus algae and coupled incorporation of carbon. Aquat. Microb. Ecol. 48(1): 35-46. http://dx.doi.org/10.3354/ame048035, meer Andersson, M.G.I.; Brion, N.; Middelburg, J.J. (2006). Comparison of nitrifier activity versus growth in the Scheldt estuary - a turbid, tidal estuary in northern Europe. Aquat. Microb. Ecol. 42(2): 149-158. dx.doi.org/10.3354/ame042149, meer Andersson, M.G.I.; Van Rijswijk, P.; Middelburg, J.J. (2006). Uptake of dissolved inorganic nitrogen, urea and amino acids in the scheldt estuary: comparison of organic carbon and nitrogen uptake. Aquat. Microb. Ecol. 44(3): 303-315. http://dx.doi.org/10.3354/ame044303, meer Gribsholt, B.; Struyf, E.; Tramper, A.; Andersson, M.G.I.; Brion, N.; De Brabandere, L.; Van Damme, S.; Meire, P.; Middelburg, J.J.; Dehairs, F.A.; Boschker, H.T.S. (2006). Ammonium transformation in a nitrogen-rich tidal freshwater marsh. Biogeochemistry 80(3): 289-298, meer Meysman, F.; Galaktionov, O.S.; Gribsholt, B.; Middelburg, J.J. (2006). Bioirrigation in permeable sediments: advective pore-water transport induced by burrow ventilation. Limnol. Oceanogr. 51(1): 142-156, meer Meysman, F.J.R.; Galaktionov, O.S.; Gribsholt, B.; Middelburg, J.J. (2006). Bio-irrigation in permeable sediments: an assessment of model complexity. J. Mar. Res. 64(4): 589-627, meer Meysman, F.J.R.; Middelburg, J.J.; Heip, C.H.R. (2006). Bioturbation: a fresh look at Darwin's last idea. Trends Ecol. Evol. 21(12): 688-695. dx.doi.org/10.1016/j.tree.2006.08.002, meer Soetaert, K.; Middelburg, J.J.; Heip, C.H.R.; Meire, P.; Van Damme, S.; Maris, T. (2006). Long-term change in dissolved inorganic nutrients in the heterotrophic Scheldt estuary (Belgium, The Netherlands). Limnol. Oceanogr. 51(1): 409-423. dx.doi.org/10.4319/lo.2006.51.1_part_2.0409, meer Struyf, E.; Dausse, A.; Van Damme, S.; Bal, K.; Gribsholt, B.; Boschker, E.; Middelburg, J.; Meire, P. (2006). Tidal marshes and biogenic silica recycling at the land-sea interface. Limnol. Oceanogr. 51(2): 838-846. https://dx.doi.org/10.4319/lo.2006.51.2.0838, meer van Oevelen, D.; Middelburg, J.J.; Soetaert, K.; Moodley, L. (2006). The fate of bacterial carbon in an intertidal sediment: Modeling an in situ isotope tracer experiment. Limnol. Oceanogr. 51(3): 1302-1314. http://dx.doi.org/10.4319/lo.2006.51.3.1302, meer van Oevelen, D.; Soetaert, K.; Middelburg, J.J.; Herman, P.M.J.; Moodley, L.; Hamels, I.; Moens, T.; Heip, C.H.R. (2006). Carbon flows through a benthic food web: integrating biomass, isotope and tracer data. J. Mar. Res. 64(3): 453-482. dx.doi.org/10.1357/002224006778189581, meer van Oevelen, D.; Moodley, L.; Soetaert, K.; Middelburg, J.J. (2006). The trophic significance of bacterial carbon in a marine intertidal sediment: Results of an in situ stable isotope labeling study. Limnol. Oceanogr. 51(5): 2349-2359. http://dx.doi.org/10.4319/lo.2006.51.5.2349, meer Veuger, B.; van Oevelen, D.; Boschker, H.T.S.; Middelburg, J.J. (2006). Fate of peptidoglycan in an intertidal sediment: An in situ ¹³C-labeling study. Limnol. Oceanogr. 51(4): 1572-1580. http://dx.doi.org/10.4319/lo.2006.51.4.1572, meer Vos, M.; Vet, L.E.M.; Wäckers, F.L.; Middelburg, J.J.; van der Putten, W.H.; Mooij, W.M.; Heip, C.H.R.; Van Donk, E. (2006). Infochemicals structure marine, terrestrial and freshwater food webs: Implications for ecological informatics. Ecological Informatics 1(1): 23-32, meer Boschker, H.T.S.; Kromkamp, J.C.; Middelburg, J.J. (2005). Biomarker and carbon isotopic constraints on bacterial and algal community structure and functioning in a turbid, tidal estuary. Limnol. Oceanogr. 50(1): 70-80. https://dx.doi.org/10.4319/lo.2005.50.1.0070, meer Duarte, A.C.; Middelburg, J.J.; Caraco, N. (2005). Major role of marine vegetation on the oceanic carbon cycle. Biogeosciences 2(1): 1-8. https://doi.org/10.5194/bgd-1-659-2004, meer Gattuso, J.P.; Dawson, N.A.; Duarte, C.M.; Middelburg, J. (2005). Patterns of publication effort in coastal biogeochemistry: a bibliometric survey (1971 to 2003). Mar. Ecol. Prog. Ser. 294: 9-22, meer Gribsholt, B.; Boschker, H.T.S.; Struyf, E.; Andersson, M.; Tramper, A.; De Brabandere, L.; Van Damme, S.; Brion, N.; Meire, P.; Dehairs, F.; Middelburg, J.J.; Heip, C.H.R. (2005). Nitrogen processing in a tidal freshwater marsh: a whole-ecosystem ¹⁵N labeling study. Limnol. Oceanogr. 50(6): 1945-1959. dx.doi.org/10.4319/lo.2005.50.6.1945, meer Meysman, F.; Galaktionov, O.S.; Middelburg, J.J. (2005). Irrigation patterns in permeable sediments induced by burrow ventilation: a case study of Arenicola marina. Mar. Ecol. Prog. Ser. 303: 195-212. https://dx.doi.org/10.3354/meps303195, meer Meysman, F.; Middelburg, J.J. (2005). Acid-volatile sulfide (AVS) - a comment. Mar. Chem. 97(1-2): 206- 212, meer Meysman, F.J.R.; Boudreau, B.P.; Middelburg, J.J. (2005). Modeling reactive transport in sediments subject to bioturbation and compaction. Geochim. Cosmochim. Acta 69(14): 3601-3617, meer Moodley, L.; Middelburg, J.J.; Herman, P.M.J.; Soetaert, K.; de Lange, G.J. (2005). Oxygenation and organic-matter preservation in marine sediments: Direct experimental evidence from ancient organic carbon-rich deposits. Geology (Boulder Colo.) 33(11): 889-892. http://dx.doi.org/10.1130/G21731.1, meer Moodley, L.; Middelburg, J.J.; Soetaert, K.; Boschker, H.T.S.; Herman, P.M.J.; Heip, C.H.R. (2005). Similar rapid response to phytodetritus deposition in shallow and deep-sea sediments. J. Mar. Res. 63(2): 457-469, meer Veuger, B.; Middelburg, J.J.; Boschker, H.T.S.; Houtekamer, M. (2005). Analysis of ¹⁵N incorporation into D-alanine: a new method for tracing nitrogen uptake by bacteria. Limnol. Oceanogr., Methods 3: 230-240, meer Andersson, J.H.; Wijsman, J.W.M.; Herman, P.M.J.; Middelburg, J.J.; Soetaert, K.; Heip, C.H.R. (2004). Respiration patterns in the deep ocean. Geophys. Res. Lett. 31(3): L03304 (1-4). https://dx.doi.org/10.1029/2003GL018756, meer Boudreau, B.P.; Meysman, F.; Middelburg, J.J. (2004). Multicomponent ionic diffusion in porewaters: coulombic effects revisited. Earth Planet. Sci. Lett. 222(2): 653- 666, meer Rochelle-Newall, E.; Pizay, M.D.; Middelburg, J.J.; Boschker, H.T.S.; Gattuso, J.P. (2004). Degradation of riverine dissolved organic matter by seawater bacteria. Aquat. Microb. Ecol. 37: 9-22, meer Rossi, F.; Herman, P.M.J.; Middelburg, J.J. (2004). Interspecific and intraspecific variation of δ¹³C and δ¹⁵N in deposit- and suspension-feeding bivalves (Macoma balthica and Cerastoderma edule): evidence of ontogenetic changes in feeding mode of Macoma balthica. Limnol. Oceanogr. 49(2): 408-414, meer Van den Meersche, K.; Middelburg, J.J.; Soetaert, K.; Van Rijswijk, P.; Boschker, H.T.S.; Heip, C.H.R. (2004). Carbon-nitrogen coupling and algal-bacterial interactions during an experimental bloom: modeling a ¹³C tracer experiment. Limnol. Oceanogr. 49(3): 862-878. https://dx.doi.org/10.4319/lo.2004.49.3.0862, meer Veuger, B.; Middelburg, J.J.; Boschker, H.T.S.; Nieuwenhuize, J.; Van Rijswijk, P.; Rochelle-Newall, E.J.; Navarro, N. (2004). Microbial uptake of dissolved organic and inorganic nitrogen in Randers Fjord. Est., Coast. and Shelf Sci. 61(3): 507-515. https://dx.doi.org/10.1016/j.ecss.2004.06.014, meer Widdows, J.; Blauw, A.; Heip, C.H.R.; Herman, P.M.J.; Lucas, C.H.; Middelburg, J.J.; Schmidt, S.; Brinsley, M.D.; Twisk, F.; Verbeek, H. (2004). Role of physical and biological processes in sediment dynamics of a tidal flat in Westerschelde Estuary, SW Netherlands. Mar. Ecol. Prog. Ser. 274: 41-56. https://dx.doi.org/10.3354/meps274041, meer Ferro, I.; Van Nugteren, P.; Middelburg, J.J.; Herman, P.M.J.; Heip, C.H.R. (2003). Effect of macrofauna, oxygen exchange and particle reworking on iron and manganese sediment biogeochemistry: a laboratory experiment. Vie Milieu (1980) 53(4): 211-220, meer Meysman, F.J.R.; Boudreau, B.P.; Middelburg, J.J. (2003). Relations between local, nonlocal, discrete and continuous models of bioturbation. J. Mar. Res. 61: 391-410, meer Meysman, F.J.R.; Middelburg, J.J.; Herman, P.M.J.; Heip, C.H.R. (2003). Reactive transport in surface sediments: 2. Media: an object-oriented problem-solving environment for early diagenesis. Comput. Geosci. 29(3): 301-318, meer Meysman, F.J.R.; Middelburg, J.J.; Herman, P.M.J.; Heip, C.H.R. (2003). Reactive transport in surface sediments: 1. Model complexity and software quality. Comput. Geosci. 29(3): 291-300, meer Boschker, H.T.S.; Middelburg, J.J. (2002). Mini review: stable isotopes and biomarkers in microbial ecology. FEMS Microbiol. Ecol. 40(2): 85-95, meer Boschker, H.T.S.; Middelburg, J.J. (2002). Stable isotopes and biomarkers in microbial ecology. FEMS Microbiol. Ecol. 40: 85-95, meer de Bie, M.J.M.; Middelburg, J.J.; Starink, M.; Laanbroek, H.J. (2002). Factors controlling nitrous oxide at the microbial community and estuarine scale. Mar. Ecol. Prog. Ser. 240: 1-9. http://dx.doi.org/10.3354/meps240001, meer Frankignoulle, M.; Middelburg, J.J. (2002). Biogases in tidal European Estuaries: the BIOGEST project. Biogeochemistry 59(1-2): 1-4. dx.doi.org/10.1023/A:1015544311392, meer Gacia, E.; Duarte, C.M.; Middelburg, J. (2002). Carbon and nutrient deposition in a Mediterranean seagrass (Posidonia oceanica) meadow. Limnol. Oceanogr. 47: 23-32. https://dx.doi.org/10.4319/lo.2002.47.1.0023, meer Middelburg, J.J.; Nieuwenhuize, J.; Iversen, N.; Høgh, N.; de Wilde, H.; Helder, W.; Seifert, R.; Christof, O. (2002). Methane distribution in European tidal estuaries. Biogeochemistry 59(1-2): 95-119. http://dx.doi.org/10.1023/A:1015515130419, meer Moens, T.; Luyten, C.; Middelburg, J.J.; Herman, P.M.J.; Vincx, M. (2002). Tracing organic matter sources of estuarine tidal flat nematodes with stable carbon isotopes. Mar. Ecol. Prog. Ser. 234: 127-137. dx.doi.org/10.3354/meps234127, meer Moodley, L.; Middelburg, J.J.; Boschker, H.T.S.; Duineveld, G.C.A.; Pel, R.; Herman, P.M.J.; Heip, C.H.R. (2002). Erratum: Bacteria and foraminifera: Key players in a short-term deep-sea benthic response to phytodetritus. Mar. Ecol. Prog. Ser. 239: 230, meer Moodley, L.; Middelburg, J.J.; Boschker, H.T.S.; Duineveld, G.C.A.; Pel, R.; Herman, P.M. J.; Heip, C.H.R. (2002). Bacteria and foraminifera: Key players in a short-term deep-sea benthic response to phytodetritus. Mar. Ecol. Prog. Ser. 236: 23-29, meer Wijsman, J.W.M.; Herman, P.M.J.; Middelburg, J.J.; Soetaert, K. (2002). A model for early diagenetic processes in sediments of the continental shelf of the Black Sea. Est., Coast. and Shelf Sci. 54(3): 403-421. https://dx.doi.org/10.1006/ecss.2000.0655, meer Dauwe, B.; Middelburg, J.J.; Herman, P.M.J. (2001). Effect of oxygen on the degradability of organic matter in subtidal and intertidal sediments of the North Sea area. Mar. Ecol. Prog. Ser. 215: 13-22, meer Heip, C.H.R.; Duineveld, G.; Flach, E.; Graf, G.; Helder, W.; Herman, P.M.J.; Lavaleye, M.S.S.; Middelburg, J.J.; Pfannkuche, O.; Soetaert, K.; Soltwedel, T.; de Stiger, H.; Thomsen, L.; Vanaverbeke, J.; de Wilde, P. (2001). The role of the benthic biota in sedimentary metabolism and sediment-water exchange processes in the Goban Spur area (NE Atlantic). Deep-Sea Res., Part 2, Top. Stud. Oceanogr. 48(14-15): 3223-3243. dx.doi.org/10.1016/S0967-0645(01)00038-8, meer Heip, C.H.R.; Herman, P.M.J.; Middelburg, J. (2001). The coin has two sides. Mar. Ecol. Prog. Ser. 211: 308, meer Herman, P.M.J.; Middelburg, J.J.; Heip, C.H.R. (2001). Benthic community structure and sediment processes on an intertidal flat: results from the ECOFLAT project. Cont. Shelf Res. 21(18-19): 2055-2071. http://dx.doi.org/10.1016/S0278-4343(01)00042-5, meer Herman, P.M.J.; Soetaert, K.; Middelburg, J.J.; Heip, C.H.R.; Lohse, L.; Epping, E.; Helder, W.; Antia, A.N.; Peinert, R. (2001). The seafloor as the ultimate sediment trap: using sediment properties to constrain benthic-pelagic exchange processes at the Goban Spur. Deep-Sea Res., Part 2, Top. Stud. Oceanogr. 48: 3245-3264, meer Middelburg, J.J.; Nieuwenhuize, J. (2001). Nitrogen isotope tracing of dissolved inorganic nitrogen behaviour in tidal estuaries. Est., Coast. and Shelf Sci. 53(3): 385-391. https://dx.doi.org/10.1006/ecss.2001.0805, meer Soetaert, K.; Herman, P.M.J.; Middelburg, J.J.; Heip, C.H.R.; Smith, C.L.; Tett, P.; Wild-Allen, K. (2001). Numerical modelling of the shelf break ecosystem: reproducing benthic and pelagic measurements. Deep-Sea Res., Part 2, Top. Stud. Oceanogr. 48(14-15): 3141-3177, meer Wijsman, J.W.M.; Middelburg, J.J.; Herman, P.M.J.; Böttcher, M.E.; Heip, C.H.R. (2001). Sulfur and iron speciation in surface sediments along the northwestern margin of the Black Sea. Mar. Chem. 74(4): 261-278. https://dx.doi.org/10.1016/S0304-4203(01)00019-6, meer Wijsman, J.W.M.; Middelburg, J.J.; Heip, C.H.R. (2001). Reactive iron in Black Sea sediments: implications for iron cycling. Mar. Geol. 172(3-4): 167-180. https://dx.doi.org/10.1016/S0025-3227(00)00122-5, meer Wijsman, J.W.M.; Middelburg, J.J.; Heip, C.H.R. (2001). Reactive iron in Black Sea sediments: implications for iron cycling. Freshwat. Biol. 55(4): 85-96, meer Abril, G.; Riou, S.A.; Etcheber, H.; Frankignoulle, M.; De Wit, R.; Middelburg, J.J. (2000). Transient, tidal time-scale, nitrogen transformations in an estuarine turbidity maximum-fluid mud system (The Gironde, south-west France). Est., Coast. and Shelf Sci. 50(5): 703-715. dx.doi.org/10.1006/ecss.1999.0598, meer Herman, P.M.J.; Middelburg, J.J.; Widdows, J.; Lucas, C.H.; Heip, C.H.R. (2000). Stable isotopes as trophic tracers: combining field sampling and manipulative labelling of food resources for macrobenthos. Mar. Ecol. Prog. Ser. 204: 79-92. https://dx.doi.org/10.3354/meps204079, meer Middelburg, J.J.; Barranguet, C.; Boschker, H.T.S.; Herman, P.M.J.; Moens, T.; Heip, C.H.R. (2000). The fate of intertidal microphytobenthos carbon: an in situ ¹³C-labeling study. Limnol. Oceanogr. 45(6): 1224-1234. http://dx.doi.org/10.4319/lo.2000.45.6.1224, meer Middelburg, J.J.; Nieuwenhuize, J. (2000). Uptake of dissolved inorganic nitrogen in turbid, tidal estuaries. Mar. Ecol. Prog. Ser. 192: 79-88. https://dx.doi.org/10.3354/meps192079, meer Middelburg, J.J.; Nieuwenhuize, J. (2000). Nitrogen uptake by heterotrophic bacteria and phytoplankton in the nitrate rich Thames estuary. Mar. Ecol. Prog. Ser. 203: 13-21, meer Moodley, L.; Boschker, H.T.S.; Middelburg, J.J.; Pel, R.; Herman, P.M.J.; de Deckere, E.; Heip, C.H.R. (2000). Ecological significance of benthic foraminifera: ¹³C labelling experiments. Mar. Ecol. Prog. Ser. 202: 289-295, meer Quinn, G.; Fee, E.; Larsen, P.S.; Shumway, S.E.; Gili, J.-M.; Kiorboe, T.; Hagerman, L.; Beninger, P.; Tessier, A.; Duarte, C.M.; Raven, J.; Middelburg, J.J.; Lesser, M.; Grémare, A.; Cole, J.; Larsen, O.N.; Beukema, J.J.; Reise, K.; Canfield, D.; Kinne, O. (2000). The peer-review system: time for re-assessment? Mar. Ecol. Prog. Ser. 192: 305-313, meer Soetaert, K.; Middelburg, J.J.; Herman, P.M.J.; Buis, K. (2000). On the coupling of benthic and pelagic biogeochemical models. Earth-Sci. Rev. 51: 173-201, meer Dauwe, B.; Middelburg, J.J.; Herman, P.M.J.; Heip, C.H.R. (1999). Linking diagenetic alteration of amino acids and bulk organic matter reactivity. Limnol. Oceanogr. 44(7): 1809-1814, meer Dauwe, B.; Middelburg, J.J.; Van Rijswijk, P.; Sinke, J.; Herman, P.M.J.; Heip, C.H.R. (1999). Enzymatically hydrolyzable amino acids in North Sea sediments and their possible implication for sediment nutritional values. J. Mar. Res. 57(1): 109-134. https://dx.doi.org/10.1357/002224099765038580, meer Herman, P.M.J.; Middelburg, J.J.; van de Koppel, J.; Heip, C.H.R. (1999). Ecology of estuarine macrobenthos. Adv. Ecol. Res. 29: 195-240, meer Middelburg, J.J.; Nieuwenhuize, J.; van Breugel, P. (1999). Black carbon in marine sediments. Mar. Chem. 65(3-4): 245-252. http://dx.doi.org/10.1016/S0304-4203(99)00005-5, meer Dauwe, B.; Middelburg, J.J. (1998). Amino acids and hexosamines as indicators of organic matter degradation state in North Sea sediments. Limnol. Oceanogr. 43(5): 782-798. https://dx.doi.org/10.4319/lo.1998.43.5.0782, meer Middelburg, J.; Nieuwenhuize, J. (1998). Carbon and nitrogen stable isotopes in suspended matter and sediments from the Schelde Estuary. Mar. Chem. 60(3-4): 217-225. dx.doi.org/10.1016/S0304-4203(97)00104-7, meer Moodley, L.; Heip, C.H.R.; Middelburg, J.J. (1998). Benthic activity in sediments of the northwestern Adriatic Sea: sediment oxygen consumption, macro- and meiofauna dynamics. J. Sea Res. 40(3-4): 263-280. dx.doi.org/10.1016/S1385-1101(98)00026-4, meer Soetaert, K.; Herman, P.M.J.; Middelburg, J.J.; Heip, C.H.R. (1998). Assessing organic matter mineralization, degradability and mixing rate in an ocean margin sediment (Northeast Atlantic) by diagenetic modeling. J. Mar. Res. 56(2): 519-534, meer Soetaert, K.; Vanaverbeke, J.; Heip, C.H.R.; Herman, P.M.J.; Middelburg, J.J.; Sandee, A.; Duineveld, G.C.A. (1997). Nematode distribution in ocean margin sediments of the Goban Spur (northeast Atlantic) in relation to sediment geochemistry. Deep-Sea Res., Part 1, Oceanogr. Res. Pap. 44(9-10): 1671-1683, meer Middelburg, J. J.; Nieuwenhuize, J.; Slim, F. J.; Ohowa, B. (1996). Sediment biogeochemistry in an East African mangrove forest (Gazi Bay,Kenya). Biogeochemistry 34(3): 133-155, meer Middelburg, J.J.; Soetaert, K.; Herman, P.M.J. (1996). Evaluation of the nitrogen isotope-pairing method for measuring benthic denitrification: A simulation analysis. Limnol. Oceanogr. 41(8): 1839-1844, meer Middelburg, J.J.; Soetaert, K.; Herman, P.M.J.; Heip, C.H.R. (1996). Denitrification in marine sediments: a model study. Global Biogeochem. Cycles 10(4): 661-673, meer Middelburg, J.J.; Klaver, G.; Nieuwenhuize, J.; Wielemaker, A.; Van der Nat, F.J.W.A.; Vlug, T. (1996). Organic matter mineralization in intertidal sediments along an estuarine gradient. Mar. Ecol. Prog. Ser. 132: 157-168. https://dx.doi.org/10.3354/meps132157, meer Moodley, L.; Herman, P.M. J.; Middelburg, J.J.; Heip, C.H.R. (1996). Comment on: Subsurface activity of benthic foraminifera. Mar. Ecol. Prog. Ser. 145(1-3): 303-304, meer Soetaert, K.; Herman, P.M.J.; Middelburg, J.J. (1996). Dynamic response of deep-sea sediments to seasonal variations: a model. Limnol. Oceanogr. 41(8): 1651-1668. http://dx.doi.org/10.4319/lo.1996.41.8.1651, meer Soetaert, K.; Herman, P.M.J.; Middelburg, J.J.; Heip, C.H.R.; deStigter, H.S.; van Weering, T.C.E.; Epping, E.; Helder, W. (1996). Modeling ²¹⁰Pb-derived mixing activity in ocean margin sediments: diffusive versus nonlocal mixing. J. Mar. Res. 54: 1207-1227, meer Soetaert, K.; Herman, P.M.J.; Middelburg, J.J. (1996). A model of early diagenetic processes from the shelf to abyssal depths. Geochim. Cosmochim. Acta 60(6): 1019-1040. http://dx.doi.org/10.1016/0016-7037(96)00013-0, meer Heip, C.H.R.; Goosen, N.K.; Herman, P.M.J.; Kromkamp, J.; Middelburg, J.J.; Soetaert, K. (1995). Production and consumption of biological particles in temperate tidal estuaries, in: Ansell, A.D. et al. Oceanogr. Mar. Biol. Ann. Rev. 33. Oceanography and Marine Biology: An Annual Review, 33: pp. 1-149, meer Middelburg, J.J.; Klaver, G.; Nieuwenhuize, J.; Markusse, R.; Vlug, T.; Van der Nat, F.J.W.A. (1995). Nitrous oxide emissions from estuarine intertidal sediments. Hydrobiologia 311(1-3): 43-55. https://dx.doi.org/10.1007/BF00008570, meer Middelburg, J.J.; Klaver, G.; Nieuwenhuize, J.; Vlug, T. (1995). Carbon and nitrogen cycling in intertidal sediments near Doel, Scheldt Estuary. Hydrobiologia 311(1-3): 57-69. https://dx.doi.org/10.1007/BF00008571, meer
Peer reviewed publicaties (13) [show]
Hofmann, A.F.; Meysman, F.J.R.; Soetaert, K.; Middelburg, J.J. (2009). Factors governing the pH in a heterotrophic, turbid, tidal estuary. Biogeosci. Discuss. 6: 197-240. dx.doi.org/10.5194/bgd-6-197-2009, meer Hofmann, A.F.; Soetaert, K.; Middelburg, J.J. (2008). Nitrogen and carbon dynamics in the Scheldt estuary at the beginning of the 21st century - a modelling study. Biogeosci. Discuss. 5: 83-161, meer Gazeau, F.; Middelburg, J.J.; Loijens, M.; Vanderborght, J.-P.; Pizay, M.-D.; Gattuso, J.P. (2006). Phytoplanktonic primary production in a nutrient-rich estuary - comparison of methods. Geophys. Res. Abstr. 8: 01682, meer Meysman, F.J.R.; Galaktionov, O.S.; Cook, P.L.M.; Janssen, F.; Huettel, M.; Middelburg, J.J. (2006). Quantifying biologically and physically induced flow and tracer dynamics in permeable sediments. Biogeosci. Discuss. 3: 1809-1858, meer Bontes, B.M.; Pel, R.; Ibelings, B.W.; Boschker, H.T.S.; Middelburg, J.J.; Van Donk, E. (2005). The effects of biomanipulation on the biogeochemistry, carbon isotopic composition and pelagic food web relations of a shallow turf lake. Biogeosci. Discuss. 2(4): 997-1031. https://dx.doi.org/10.5194/bgd-2-997-2005, meer Gazeau, F.; Gattuso, J.P.; Middelburg, J.J.; Brion, N.; Schiettecatte, L.-S.; Frankignoulle, M.; Borges, A.V. (2005). Planktonic and whole system metabolism in a nutrient-rich estuary (the Scheldt estuary). Estuaries 28(6): 868-883. http://dx.doi.org/10.1007/BF02696016, meer Rochelle-Newall, E.J.; Barrón, C.; Borges, A.V.; Duarte, C.M.; Frankignoulle, M.; Gazeau, F.; Middelburg, J.J.; Pizay, M.-D.; Thioulouse, J.; Gattuso, J.P. (2005). Community metabolism in three contrasting coastal ecosystems. Geophys. Res. Abstr. 7: 09330, meer Gazeau, F.; Borges, A.V.; Schiettecatte, L.-S.; Middelburg, J.; Frankignoulle, M.; Gattuso, J.P. (2004). Pelagic metabolism of the Scheldt estuary on an annual scale. Geophys. Res. Abstr. 6: 05737, meer Middelburg, J.J.; Soetaert, K.; Herman, P.M.J. (1996). Empirical relationships for use in global diagenetic models. Deep-Sea Res. 44(2): 327-344, meer de Lange, G.J.; Middelburg, J.J.; Poorter, R.P.; Shofiyah, S. (1989). Ferromanganese encrustations on the seabed west of Misool, eastern Indonesia. Neth. J. Sea Res. 24(4): 541-553, meer Middelburg, J.J.; de Lange, G.J.; van der Weijden, C.H.; Shofiyah, S. (1989). Sediment chemistry of Kau Bay, Halmahera (eastern Indonesia). Neth. J. Sea Res. 24(4): 607-613, meer Middelburg, J.J.; de Lange, G.J. (1989). The isolation of Kau Bay during the last glaciation: direct evidence from interstitial water chlorinity. Neth. J. Sea Res. 24(4): 615-622, meer van der Weijden, C.H.; de Lange, G.J.; Middelburg, J.J.; van der Sloot, H.A.; Hoede, D.; Shofiyah, S. (1989). Geochemical characteristics of Kau Bay water. Neth. J. Sea Res. 24(4): 583-589, meer
Boeken (2) [show]
Middelburg, J.J. (2019). Marine carbon biogeochemistry: A primer for earth system scientists. SpringerBriefs in Earth System Sciences. Springer: Cham. vi, 118 pp. https://dx.doi.org/10.1007/978-3-030-10822-9, meer Wolanski, E.; Mclusky, D.S.; Laane, R.W.P.; Middelburg, J.J. (Ed.) (2011). Treatise on Estuarine and Coastal Science: 5. Biogeochemistry. Elsevier: Amsterdam. ISBN 978-0-12-387745-1. 362 pp., meer
Boekhoofdstukken (36) [show]
Hagens, M.; Slomp, C.P.; Meysman, F.J.R.; Brenner, H.; Borges, A.V.; Middelburg, J.J. (2013). The influence of biogeochemical processes on the pH dynamics in the seasonally hypoxic saline Lake Grevelingen, The Netherlands, in: The 45th International Liège Colloquium on Ocean Dynamics. The variability of primary production in the ocean: from the synoptic to the global scale, Liège, Belgium, 13-17 May, 2013: Abstracts. pp. [1], meer Braeckman, U.; Provoost, P.; Sabbe, K.; Middelburg, J.J.; Soetaert, K.; Vincx, M.; Vanaverbeke, J. (2011). Temporal variation in macrobenthic diet as inferred from fatty acid biomarkers, in: Braeckman, U. Macrobenthos structuring the sea floor: importance of its functional biodiversity for the benthic ecosystem = De structurerende rol van macrobenthos in de zeebodem: belang van de functionele biodiversiteit voor het benthische ecosysteem. pp. 103-130, meer Braeckman, U.; Provoost, P.; Gribsholt, B.; Van Gansbeke, D.; Middelburg, J.; Soetaert, K.; Vincx, M.; Vanaverbeke, J. (2011). Role of macrofauna functional traits and density in biogeochemical fluxes and bioturbation, in: Braeckman, U. Macrobenthos structuring the sea floor: importance of its functional biodiversity for the benthic ecosystem = De structurerende rol van macrobenthos in de zeebodem: belang van de functionele biodiversiteit voor het benthische ecosysteem. pp. 25-50, meer Braeckman, U.; Provoost, P.; Moens, T.; Soetaert, K.; Middelburg, J.J.; Vincx, M.; Vanaverbeke, J. (2011). Biological vs. physical mixing effects on benthic food web dynamics, in: Braeckman, U. Macrobenthos structuring the sea floor: importance of its functional biodiversity for the benthic ecosystem = De structurerende rol van macrobenthos in de zeebodem: belang van de functionele biodiversiteit voor het benthische ecosysteem. pp. 77-101, meer Gazeau, F.; Middelburg, J.J.; Heip, C.H. (2011). Benthic calcification in the Dutch Coastal zone and effect on ocean acidification on the growth of commercially important bivalve species, in: Heip, C. et al. (Ed.) Aspects of coastal research in contribution to LOICZ in the Netherlands and Flanders (2002-2010). LOICZ Research & Studies, 38: pp. 108-116, meer Heip, C.H.R.; Middelburg, J.J.; Philippart, C.J.M. (2011). Functioning of ecosystems at the land-ocean interface, in: Wolanski, E. et al. (Ed.) Treatise on Estuarine and Coastal Science: 7. Functioning ecosystems at the land-ocean interface. pp. 1-3. dx.doi.org/10.1016/B978-0-12-374711-2.00701-4, meer Middelburg, J.J.; Andersson, M.; Boschker, E.; Brion, N.; Dehairs, F.; Dijkman, N.; Kromkamp, J.C.; Soetaert, K. (2011). Carbon and nitrogen cycling in the Scheldt estuary: the major players, long-term changes and an integrated view, in: Heip, C. et al. (Ed.) Aspects of coastal research in contribution to LOICZ in the Netherlands and Flanders (2002-2010). LOICZ Research & Studies, 38: pp. 148-154, meer Moens, T.; Moodley, L.; Steyaert, M.; Van Colen, C.; Van Oevelen, D.; Boschker, H.T.S.; Herman, P.M.J.; Middelburg, J.J.; Soetaert, K.; Ysebaert, T.; Vincx, M. (2011). The structure and functional roles of tidal flat meiobenthos, in: Heip, C. et al. (Ed.) Aspects of coastal research in contribution to LOICZ in the Netherlands and Flanders (2002-2010). LOICZ Research & Studies, 38: pp. 171-184, meer Van den Meersche, K.; Middelburg, J.J.; Soetaert, K.; Van Rijswijk, P.; Boschker, H.T.S.; Heip, C.H.R. (2009). Carbon-nitrogen coupling and algal-bacterial interactions during an experimental bloom: modeling a ¹³C tracer experiment, in: Van den Meersche, K. Carbon flows in the planktonic food web of temperate estuaries: a combined approach using stable isotopes, biomarkers and modeling. pp. 97-129, meer Van den Meersche, K.; Soetaert, K.; Middelburg, J.J. (2009). A Bayesian Compositional Estimator for microbial taxonomy based on biomarkers, in: Van den Meersche, K. Carbon flows in the planktonic food web of temperate estuaries: a combined approach using stable isotopes, biomarkers and modeling. pp. 51-66, meer Van den Meersche, K.; Soetaert, K.; Dijkman, N.A.; Middelburg, J.J. (2009). Plankton dynamics in an estuarine plume: a ¹³C and ¹⁵N tracer study, in: Van den Meersche, K. Carbon flows in the planktonic food web of temperate estuaries: a combined approach using stable isotopes, biomarkers and modeling. pp. 131-160, meer Kroeze, C.; Middelburg, J.J.; Leemans, R.; Escobar-Briones, E.; Fennel, W.; Glaser, M.; Harashima, A.; Liu, K.-K.; Meybeck, M. (2008). Integrating tools to assess changes in semi-enclosed marine systems, in: Urban Jr., E.R. et al. (Ed.) Watersheds, bays, and bounded seas: The science and management of semi-enclosed marine systems. Scientific Committee on Problems of the Environment (SCOPE) Series, 70: pp. 77-96, meer Middelburg, J.J.; Herman, P.M.J. (2007). Organic matter processing in tidal estuaries, in: Goldberg, E.D. (Ed.) (1974). Marine chemistry. The sea: ideas and observations on progress in the study of the seas, 5: pp. 127-147. http://dx.doi.org/10.1016/j.marchem.2006.02.007, meer van Tussenbroek, B.I.; Vonk, J.A.; Stapel, J.; Erftemeijer, P.L.A.; Middelburg, J.J.; Zieman, J.C. (2006). The biology of Thalassia: paradigms and recent advances in research, in: Larkum, A.W.D. et al. (Ed.) Seagrasses: biology, ecology and conservation. pp. 409-439, meer Aristegui, J.; Agusti, S.; Middelburg, J.J.; Duarte, C.M. (2005). Respiration in the mesopelagic and bathypelagic zones of the ocean, in: del Giorgio, P.A. et al. (Ed.) Respiration in aquatic ecosystems. pp. 181-205, meer Heip, C.H.R.; Herman, P.M.J.; Middelburg, J.J.; Moodley, L.; Soetaert, K.; Ysebaert, T.J. (2005). The ecology of estuarine intertidal flats: the example of the Westerschelde, in: Wilson, J.G. (Ed.) The intertidal ecosystem: the value of Ireland’s shores. pp. 179-195, meer Meysman, F.J.R.; Galaktionov, O.S.; Madani, S.; Middelburg, J.J. (2005). Modelling biological interactions in aquatic sediments as coupled reactive transport, in: Kristensen, E. et al. (Ed.) Interactions between macro- and microorganisms in marine sediments. Coastal and Estuarine Studies, 60: pp. 359-388, meer Middelburg, J.J.; Duarte, C.M.; Gattuso, J.P. (2005). Respiration in coastal benthic communities, in: del Giorgio, P.A. et al. (Ed.) Respiration in aquatic ecosystems. pp. 207-225, meer Middelburg, J.J.; Soetaert, K. (2005). The role of sediments in shelf ecosystem dynamics, in: Robinson, A.R. et al. (Ed.) The global coastal ocean. Multiscale interdisciplinary processes. The sea: ideas and observations on progress in the study of the seas, 13: pp. 353-374, meer Struyf, E.; Dausse, A.; Van Damme, S.; Bal, K.; Gribsholt, B.; Boschker, E.; Middelburg, J.; Meire, P. (2005). Tidal marshes and biogenic silica recycling at the land-sea interface, in: Struyf, E. The role of freshwater marshes in estuarine silica cycling (Scheldt estuary) = De rol van zoetwaterschorren in de estuariene siliciumcyclus (Schelde-estuarium). pp. 75-97, meer Struyf, E.; Van Damme, S.; Gribsholt, B.; Middelburg, J.J.; Meire, P. (2005). Biogenic silica in freshwater marsh sediments and vegetation (Schelde estuary, Belgium), in: Struyf, E. The role of freshwater marshes in estuarine silica cycling (Scheldt estuary) = De rol van zoetwaterschorren in de estuariene siliciumcyclus (Schelde-estuarium). pp. 33-58, meer Middelburg, J.J.; Soetaert, K.; Herman, P.M.J.; Boschker, H.T.S.; Heip, C.H.R. (2004). Burial of nutrient in coastal sediments: the role of primary producers, in: Nielsen, S.L. et al. (Ed.) Estuarine nutrient cycling: the influence of primary producers: the fate of nutrients and biomass. Aquatic Ecology Series, 2: pp. 217-230, meer Middelburg, J.J.; Soetaert, K.; Herman, P.M.J.; Boschker, H.T.S.; Heip, C.H.R. (2004). Burial of nutrient in coastal sediments: the role of primary producers, in: Nielsen, S.L. et al. (Ed.) Estuarine nutrient cycling: the influence of primary producers: the fate of nutrients and biomass. Aquatic Ecology Series, 2: pp. 217-230, meer Van den Meersche, K.; Middelburg, J.J.; Soetaert, K.; Van Rijswijk, P. (2003). Coupling of the carbon and nitrogen metabolism of algae and bacteria: modelling a ¹³C pulse-chase experiment, in: Van den Meersche, K. Koppeling van koolstof- en stikstofmetabolisme van algen en bacteriën in een estuarien pelagisch ecosysteem: bepaling door modelleren van een pulse-chase experiment met ¹³C-labelling. pp. A1-A15, meer Brion, N.; De Galan, S.; Billen, G.; Garnier, J.; Middelburg, J. (2002). The nitrogen cycle in the Seine and Scheldt estuaries, in: ECSA Local Meeting: ecological structures and functions in the Scheldt Estuary: from past to future, Antwerp, Belgium October 7-10, 2002: abstract book. pp. 24, meer Meysman, F.J.R.; Middelburg, J.J.; Herman, P.M.J.; Heip, C.H.R. (2002). In the wake of Darwin: using ab-initio continuum mechanics to describe the influence of macro-organisms on sediments, in: Hassanizader, S.M. et al. Computational methods in water resources, vol. 1(1). Developments in Water Science, 47: pp. 587-593, meer Middelburg, J.J.; de Bie, M.J.M.; Nieuwenhuize, J. (2002). Methane and nitrous oxide in tidal estuaries, in: ECSA Local Meeting: ecological structures and functions in the Scheldt Estuary: from past to future, Antwerp, Belgium October 7-10, 2002: abstract book. pp. 22, meer Soetaert, K.; Middelburg, J.; Wijsman, J.W.M.; Herman, P.M.J.; Heip, C.H.R. (2002). Ocean margin early diagenetic processes and models, in: Wefer, G. et al. (Ed.) Ocean margin systems. pp. 157-177, meer Wijsman, J.W.M.; Herman, P.M.J.; Middelburg, J.J.; Soetaert, K. (2001). A model for early diagenetic processes in sediments of the continental shelf of the Black Sea, in: Wijsman, J.W.M. Early diagenetic processes in northwestern Black Sea sediments. NIOO Thesis, 8: pp. 43-66, meer Wijsman, J.W.M.; Middelburg, J.J.; Soetaert, K.; Herman, P.M.J. (2001). Benthic mineralization in marine environments, in: Wijsman, J.W.M. Early diagenetic processes in northwestern Black Sea sediments. NIOO Thesis, 8: pp. 7-21, meer Dauwe, B.; Middelburg, J.J.; Van Rijswijk, P.; Sinke, J.; Herman, P.M.J.; Heip, C.H.R. (1999). Enzymatically hydrolyzable amino acids in North Sea sediments and their possible implication for sediment nutritional values, in: Dauwe, B. Organic matter quality in North Sea sediments. pp. 39-62, meer de Wilde, H.P.J.; Helder, W.; Van Raaphorst, W.; Middelburg, J.J.; Sinjewel, A.; Visser, R.J.W. (1999). Methane in the Rhine estuary, its lower tributaries, and adjacent coastal waters, in: de Wilde, H.P.J. Nitrous oxide and methane in marine systems. pp. 75-97, meer Dauwe, B.; Middelburg, J.J. (1998). Amino acids and hexosamines as indicators of organic matter degradation state in North Sea sediments, in: Dauwe, B. (1999). Organic matter quality in North Sea sediments. pp. 89-112, meer Middelburg, J.J.; Klaver, G.; Nieuwenhuize, J.; Markusse, R.; Vlug, T.; Van der Nat, F.J.W.A. (1995). Nitrous oxide emissions from estuarine intertidal sediments, in: Heip, C.H.R. et al. Major biological processes in European tidal estuaries. Developments in Hydrobiology, 110: pp. 43-55, meer Middelburg, J.J.; Nieuwenhuize, J.; Markusse, R.; Ohowa, B. (1995). Some preliminary results on the biogeochemistry of mangrove sediments from Gazi Bay, in: Heip, C.H.R. et al. (Ed.) Monsoons and coastal ecosystems in Kenya. pp. 51-66, meer Middelburg, J.J.; Klaver, G.; Nieuwenhuize, J.; Vlug, T. (1995). Carbon and nitrogen cycling in intertidal sediments near Doel, Scheldt Estuary, in: Heip, C.H.R. et al. Major biological processes in European tidal estuaries. Developments in Hydrobiology, 110: pp. 57-69, meer
Abstracts (18) [show]
Braeckman, U.; Provoost, P.; Soetaert, K.; Middelburg, J.J.; Vincx, M.; Vanaverbeke, J. (2009). Does macrofauna affect the benthic processing of a settling phytoplankton bloom?, in: Mees, J. et al. (Ed.) Book of abstracts: an overview of marine research in Belgium anno 2009. 10th VLIZ Young Scientists' Day. Special edition at the occasion of 10 years VLIZ. VLIZ Special Publication, 43: pp. 23, meer De Laender, F.; van Oevelen, D.; Frantsen, S.; Soetaert, K.; Janssen, C.R.; Middelburg, J.J. (2009). Seasonal PCB bioaccumulation in an Arctic marine ecosystem: a model analysis, in: Mees, J. et al. (Ed.) Book of abstracts: an overview of marine research in Belgium anno 2009. 10th VLIZ Young Scientists' Day. Special edition at the occasion of 10 years VLIZ. VLIZ Special Publication, 43: pp. 44, meer De Laender, F.; Soetaert, K.; Janssen, C.R.; Middelburg, J.J. (2009). Stressor effects on aquatic food web functioning: methodology and case study, in: Mees, J. et al. (Ed.) Book of abstracts: an overview of marine research in Belgium anno 2009. 10th VLIZ Young Scientists' Day. Special edition at the occasion of 10 years VLIZ. VLIZ Special Publication, 43: pp. 43, meer Van Colen, C.; Montserrat, F.; Middelburg, J.J.; Herman, P.M.; Andersson, M.; Rossi, F.; Gribsholt, B.; Vincx, M.; Ysebaert, T.; Degraer, S. (2009). Restoration of estuarine tidal mudflat sediments after hypoxia, in: ASLO Aquatic Sciences Meeting 2009: A Cruise Through Nice Waters, 25-30 January 2009, Nice, France. pp. 272, meer van den Heuvel-Greve, M.J.; van Duren, L.A.; Brasseur, S.M.; Middelburg, J.J.; Leonards, P.E.; Zabel, A.K.; Vethaak, A.D. (2009). A novel method in dietary studies using ecotoxicological data, in: ASLO Aquatic Sciences Meeting 2009: A Cruise Through Nice Waters, 25-30 January 2009, Nice, France. pp. 273, meer Van Oostende, N.; Boschker, H.T.S.; Middelburg, J.J.; Vyverman, W.; Sabbe, K. (2009). Bacterial influence on the extracellular carbohydrate pool in experimental Emiliania huxleyi blooms, in: Mees, J. et al. (Ed.) VLIZ Young Scientists' Day, Brugge, Belgium 6 March 2009: book of abstracts. VLIZ Special Publication, 41: pp. 73, meer Braeckman, U.; Provoost, P.; Gribsholt, B.; Middelburg, J.; Soetaert, K.; Vincx, M.; Vanaverbeke, J. (2008). The role of macrofauna in the functioning of a sea floor: is there any seasonal, density or functional identity effect?, in: Mees, J. et al. (Ed.) VLIZ Young Scientists' Day, Brugge, Belgium, 29 February 2008: book of abstracts. VLIZ Special Publication, 40: pp. 33, meer Braeckman, U.; Vincx, M.; Provoost, P.; Gribsholt, B.; Middelburg, J.; Soetaert, K.; Van Gansbeke, D.; Vanaverbeke, J. (2008). The role of macrofauna in the functioning of a sea floor: is there any seasonal, density or functional identity effect?, in: World Conference on Marine Biodiversity, Valencia, Spain, 11-15 November 2008: book of abstracts. pp. 1, meer Van Colen, C.; Vincx, M.; Montserrat, F.; Middelburg, J.; Herman, P.; Andersson, M.; Rossi, F.; Gribsholt, B.; Ysebaert, T. (2008). Benthic and biogeochemical recovery after and induced hypoxic event: the structuring role of macrofauna succession, in: World Conference on Marine Biodiversity, Valencia, Spain, 11-15 November 2008: book of abstracts. pp. 2, meer Vos, M.; Soetaert, K.; Heip, C.; Middelburg, J.; Herman, P. (2008). Biodiversity, trait dynamics and ecosystem processes under gradual and catastrophic disturbance: a model analysis, in: World Conference on Marine Biodiversity, Valencia, Spain, 11-15 November 2008: book of abstracts. pp. 1, meer Frankignoulle, M.; Borges, A.V.; Gazeau, F.; Delille, B.; Schiettecatte, L.-S.; Gattuso, J.P.; Rochelle-Newall, E.; González-Benítez, N.; Bonilla-Findji, O.; Pizay, M.D.; Wollast, R.; Vanderborcht, J.P.; Chou, L.; Loijens, M.; Folmer, I.; Middelburg, J.J.; Van den Meersche, K.; Boschker, H.T.S.; Veuger, B.; Duarte, C.M.; Barron, C.; Navarro, N.; Iversen, N.; Elliot, M.; Hemingway, K.L.; Burdon, D.; Campuzano-Guillen, F.J.; Allen, J. (2007). Nutrients cycling and the trophic status of coastal ecosystems (EUROTROPH), in: Cieslikiewicz, W. et al. (Ed.) Proceedings of the EurOCEAN 2004: European Conference on Marine Science & Ocean Technology: Celebrating European marine science; building the European research area; communicating marine science, Galway, Ireland, 10-13 May 2004. pp. 282-283, meer Vandewiele, S.; Kayal, E.; van Oevelen, D.; Middelburg, J.J. (2007). An isotope dilution approach to assess the nutritional value of detritus, in: Mees, J. et al. (Ed.) VLIZ Young Scientists' Day, Brugge, Belgium 2 March 2007: book of abstracts. VLIZ Special Publication, 39: pp. 67, meer Frankignoulle, M.; Borges, A.V.; Gazeau, F.; Delille, B.; Schiettecatte, L.-S.; Gattuso, J.P.; Rochelle-Newall, E.; González-Benítez, N.; Bonilla-Findji, O.; Pizay, M.D.; Wollast, R.; Vanderborcht, J.P.; Chou, L.; Loijens, M.; Folmer, I.; Middelburg, J.J.; Van den Meersche, K.; Boschker, H.T.S.; Veuger, B.; Duarte, C.M.; Barron, C.; Navarro, N.; Iversen, N.; Elliot, M.; Hemingway, K.L.; Burdon, D.; Campuzano-Guillen, F.J.; Allen, J. (2004). Nutrients cycling and the trophic status of coastal ecosystems (EUROTROPH), in: European Conference on Marine Science and Ocean Technology. Celebrating European marine science: building the European research area: communicating marine science, 10th - 13th May 2004, Galway, Ireland: abstract book. pp. 118-119, meer Gazeau, F.; Borges, A.V.; Schiettecatte, L.-S.; Middelburg, J.; Frankignoulle, M.; Gattuso, J.P. (2004). Pelagic metabolism of the Scheldt estuary measured by the oxygen method on an annual scale, in: Mees, J. et al. (Ed.) VLIZ Young Scientists' Day, Brugge, Belgium 5 March 2004: book of abstracts. VLIZ Special Publication, 17: pp. 49, meer Van den Meersche, K.; Soetaert, K.; Middelburg, J.; Heip, C.H.R.; Vincx, M. (2004). The microbial food web in the estuarine water column: a link or a sink?, in: Mees, J. et al. (Ed.) VLIZ Young Scientists' Day, Brugge, Belgium 5 March 2004: book of abstracts. VLIZ Special Publication, 17: pp. 74, meer Galaktionov, O.S.; Meysman, F.J.R.; Middelburg, J.J. (2003). Bio-irrigation induced by Arenicola marina: classical assumptions vs. numerical modeling, in: Rullkötter, J. (Ed.) Biogeochemistry of tidal flats: Proceedings of a workshop at the Hanse Institute of Advanced Study, May 14-17, Delmenhorst, Germany. Abstract volume. Forschungszentrum Terramare Berichte, 12: pp. 59-62, meer Meysman, F.J.R.; Heip, C.H.R.; Herman, P.M.J.; Middelburg, J.J. (2001). MEDIA: a modelling environment for surface sediment biogeochemistry, in: VLIZ Young Scientists' Day, Brugge, Belgium 23 February 2001: book of abstracts. VLIZ Special Publication, 1: pp. 50-51, meer Heip, C.; Herman, P.; Middelburg, J.; Soetaert, K. (1998). Effects of physical impacts on estuarine ecosystems, in: ECSA 29 Symposium. Estuarine Research and Management in Developed and Developping countries: Joint ECSA and CERM symposium at the University of Port Elizabeth 13-17 July 1998. Abstract book. pp. 43, meer
Overige publicaties (7) [show]
Van den Meersche, K.; Van Rijswijk, P.; Soetaert, K.; Middelburg, J.J. (2009). Autochthonous and allochthonous contributions to mesozooplankton diet in a tidal river and estuary: integrating carbon isotope and fatty acid constraints, in: Van den Meersche, K. Carbon flows in the planktonic food web of temperate estuaries: a combined approach using stable isotopes, biomarkers and modeling. pp. 73-96, meer Vandewiele, S.; Kayal, E.; van Oevelen, D.; Middelburg, J.J. (2007). An isotope dilution approach to assess the nutritional value of detritus. Netherlands Institute of Ecology (NIOO): Yerseke. 1 poster pp., meer Struyf, E.; Meire, P.; Van Damme, S.; Middelburg, J. (2006). Zoetwaterschorren als siliciumbuffers in het Schelde-estuarium. Water Nieuwsbrief 24, meer Madani, S.; Meysman, F.J.R.; Middelburg, J.J. (2003). Biogeochemical modelling of sediments from the Santa Barbara basin (California). Berichte (Forsch.zent. Terramare) 12: 89-90, meer Meysman, F.J.R.; Boudreau, B.P.; Middelburg, J.J. (2003). New developments in the modelling of bioturbation in aquatic sediments: relations between local, non-local, discrete and continuous models. Berichte (Forsch.zent. Terramare) 12: 91-93, meer Dauwe, B.; Middelburg, J.J.; Herman, P.M.J.; Heip, C.H.R. (1999). Particulate organic matter degradation in the ocean: changes in biochemical composition and reactivity are linked, in: Dauwe, B. Organic matter quality in North Sea sediments. pp. 113-120, meer Dauwe, B.; Middelburg, J.J.; Herman, P.M.J. (1999). Degradability of organic matter in subtidal and intertidal sediments of the North Sea area, in: Dauwe, B. Organic matter quality in North Sea sediments. pp. 63-87, meer
Thesis (co-)promotor (13) [show]
Mueller, C.E. (2014). The sum is more than its parts: key species in the functioning of cold-water coral reefcommunities. PhD Thesis. Utrecht University: [s.l.]. 158 pp. https://hdl.handle.net/1874/290254, meer de Kluijver, A. (2012). Carbon flows in natural plankton communities in the Anthropocene. PhD Thesis. Universiteit Utrecht: [s.l.]. ISBN 978-90-3935-846-7. 1-150 pp. hdl.handle.net/1874/258022, meer Pozzato, L. (2012). Prokaryotic, protozoan and metazoan processing of organic matter in sediments: a tracer approach. PhD Thesis. Rijksuniversiteit Utrecht: [s.l.]. 154 pp. hdl.handle.net/1874/256528, meer Hofmann, A.F. (2009). Kwantificatie van de invloed van biogeochemische processen op de pH van natuurlijke wateren = Quantifying the influences of biogeochemical processes on pH of natural waters. PhD Thesis. University of Utrecht: Utrecht. ISBN 978-90-5744-166-0. 248 pp., meer Van den Meersche, K. (2009). Carbon flows in the planktonic food web of temperate estuaries: a combined approach using stable isotopes, biomarkers and modeling. PhD Thesis. Universiteit Gent, Vakgroep Biologie, Sectie Mariene Biologie: Gent. 199 pp., meer Evrard, V. (2007). Stabiele isotopen van koolstof en stikstof als merkers voor de transformaties van organisch materiaal in subtidale zandbodems = Assessing the fate of organic matter in subtidal sandy sediments using carbon and nitrogen stable isotopes as deliberate tracers. PhD Thesis. Universiteit Utrecht: Utrecht. ISBN 978-90-5744-142-4. 119 pp., meer Andersson, J.H. (2006). Sedimentrespiratie in de overgang van het continentale plat naar de diepe oceaan = Respiration in ocean margin sediments. PhD Thesis. NIOO: Utrecht. ISBN 978-90-5744-148-6. 171 pp., meer Veuger, B. (2006). Een nieuwe methode voor het traceren van stikstof- en koolstofstromen door bacteriën en algen in aquatische microbiële gemeenschappen: Analyse van 15N- en 13C-incorporatie in D-alanine en andere hydrolyseerbare aminozuren = A new method for tracing flows of nitorgen and carbon through bacteria and algae in aquatic microbial communities : Analysis of 15N- and 13C-incorporation into D-alanine and other hydrolysable amino acids. NIOO Thesis, 47. PhD Thesis. Universiteit Utrecht: Utrecht. ISBN 90-5744-129-2. 153 pp., meer Struyf, E. (2005). The role of freshwater marshes in estuarine silica cycling (Scheldt estuary) = De rol van zoetwaterschorren in de estuariene siliciumcyclus (Schelde-estuarium). PhD Thesis. Universiteit Antwerpen: Antwerpen. 162 pp., meer van Oevelen, D. (2005). The structure of marine benthic food webs: combining stable isotope techniques and inverse modeling. PhD Thesis. Rijksuniversiteit Groningen: Groningen. 143 pp., meer Ferro, I. (2003). Cycling of iron and manganese in freshwater, estuarine and deep sea sediments. PhD Thesis. Rijksuniversiteit Groningen: Groningen. 162 pp., meer Van der Nat, F.J.W.A. (2000). Methane emission from freshwater marshes. PhD Thesis. Katholieke Universiteit: Nijmegen. ISBN 90-9013529-4. 133 pp., meer Andersson, M. [s.d.]. De stikstofkringloop in een troebel getijdenestuarium = Nitrogen cycling in a turbid, tidal estuary. Mededelingen Faculteit Geowetenschappen Universiteit Utrecht, 282. PhD Thesis. [S.n.]: Utrecht. ISBN 978-90-5744-147-9. 172 pp., meer

Alle informatie in het Integrated Marine Information System (IMIS) valt onder het VLIZ Privacy beleid

Top | Instituut | Publicaties | Projecten | Datasets